Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 U6.92-201ENST00000636464 89 ntBASIC4.84□□□□□ -1.63
HOXD8P13378 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXD8P13378 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
HOXD8P13378 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXD8P13378 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXD8P13378 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXD8P13378 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD8P13378 Y_RNA.143-201ENST00000363520 106 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 RNU6-378P-201ENST00000384324 107 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 MIR190B-201ENST00000401119 79 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 Y_RNA.602-201ENST00000410535 92 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 EIF4A1P3-201ENST00000411521 244 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD8P13378 RPS26P2-201ENST00000440331 348 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXD8P13378 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD8P13378 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
HOXD8P13378 AC010469.2-201ENST00000496412 480 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD8P13378 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.83□□□□□ -1.64
HOXD8P13378 SERF1AP1-201ENST00000514575 187 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 RNU6-612P-201ENST00000516909 102 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXD8P13378 AC022968.1-201ENST00000567372 442 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 MIR3133-201ENST00000583157 78 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 AC073657.2-201ENST00000605661 303 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 MIR6867-201ENST00000610636 67 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 AC009318.2-201ENST00000610917 651 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.83□□□□□ -1.64
HOXD8P13378 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 OR4G2P-202ENST00000641004 1759 ntBASIC4.83□□□□□ -1.64
HOXD8P13378 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.83□□□□□ -1.64
HOXD8P13378 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXD8P13378 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXD8P13378 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 LINC02555-201ENST00000563933 1951 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 Y_RNA.16-201ENST00000362421 102 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 RNU6-545P-201ENST00000362681 104 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 RNU6-173P-201ENST00000364215 104 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 RNY1-201ENST00000364228 113 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 RNU6-187P-201ENST00000384139 106 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 RNU6-662P-201ENST00000384253 104 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 Y_RNA.644-201ENST00000459006 113 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.82□□□□□ -1.64
HOXD8P13378 Y_RNA.674-201ENST00000516362 113 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 SNORA25.14-201ENST00000516481 132 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 CASP1P1-201ENST00000526345 212 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 MIR4458-201ENST00000578872 75 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 SNX18P1Y-201ENST00000616231 511 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 AC034229.5-201ENST00000624258 185 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 AC107068.1-201ENST00000563286 4218 ntBASIC4.82□□□□□ -1.64
HOXD8P13378 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.82□□□□□ -1.64
HOXD8P13378 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HOXD8P13378 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HOXD8P13378 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD8P13378 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.81□□□□□ -1.64
HOXD8P13378 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.81□□□□□ -1.64
HOXD8P13378 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
HOXD8P13378 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 RNA5SP175-201ENST00000364275 119 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 SNORA70.4-201ENST00000365509 134 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 SNORD115-46-201ENST00000390982 71 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RPL21P75-201ENST00000396599 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 RPL21P28-201ENST00000401418 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD8P13378 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.81□□□□□ -1.64
HOXD8P13378 AL590556.1-201ENST00000423231 483 ntBASIC4.81□□□□□ -1.64
HOXD8P13378 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HOXD8P13378 AL445433.1-201ENST00000457507 257 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms