Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AC007619.2-201ENST00000605743 379 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AP002360.4-201ENST00000606980 481 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AC069200.1-201ENST00000609511 323 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AC087241.4-201ENST00000612441 480 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
MT-ND1P03886 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
MT-ND1P03886 AC138649.3-201ENST00000622154 254 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 MIR3651-201ENST00000630427 90 ntBASIC2.59□□□□□ -1.99
MT-ND1P03886 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MT-ND1P03886 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -2
MT-ND1P03886 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 SNORA48.7-201ENST00000391302 135 ntBASIC2.58□□□□□ -2
MT-ND1P03886 BX682237.1-201ENST00000415016 335 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC114491.1-201ENST00000416095 246 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 AC137499.1-201ENST00000427602 88 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC133104.1-201ENST00000429100 218 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
MT-ND1P03886 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 AL451074.3-201ENST00000437709 472 ntBASIC2.58□□□□□ -2
MT-ND1P03886 HMGB3P12-201ENST00000438745 556 ntBASIC2.58□□□□□ -2
MT-ND1P03886 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.58□□□□□ -2
MT-ND1P03886 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND1P03886 AP000705.1-201ENST00000454567 350 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND1P03886 BX510359.1-201ENST00000456973 237 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC013267.1-201ENST00000458227 267 ntBASIC2.58□□□□□ -2
MT-ND1P03886 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
MT-ND1P03886 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 RPL36AP51-201ENST00000487216 318 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC083906.5-201ENST00000503722 328 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC108078.1-201ENST00000508073 725 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
MT-ND1P03886 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 SNORA31.3-201ENST00000516029 96 ntBASIC2.58□□□□□ -2
MT-ND1P03886 SNORA74D-201ENST00000516404 141 ntBASIC2.58□□□□□ -2
MT-ND1P03886 RN7SKP258-201ENST00000517151 304 ntBASIC2.58□□□□□ -2
MT-ND1P03886 RN7SKP40-201ENST00000517211 242 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 AC011979.2-201ENST00000527568 352 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
MT-ND1P03886 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 AC245505.1-201ENST00000556398 224 ntBASIC2.58□□□□□ -2
MT-ND1P03886 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
MT-ND1P03886 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.58□□□□□ -2
MT-ND1P03886 AC011471.1-201ENST00000585766 187 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AL121992.2-201ENST00000606262 256 ntBASIC2.58□□□□□ -2
MT-ND1P03886 AC244100.1-202ENST00000621554 382 ntBASIC2.58□□□□□ -2
MT-ND1P03886 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
MT-ND1P03886 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
MT-ND1P03886 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.58□□□□□ -2
MT-ND1P03886 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
MT-ND1P03886 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
MT-ND1P03886 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
MT-ND1P03886 HSPE1P11-201ENST00000339579 310 ntBASIC2.57□□□□□ -2
MT-ND1P03886 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
MT-ND1P03886 MIR422A-201ENST00000362286 90 ntBASIC2.57□□□□□ -2
MT-ND1P03886 Y_RNA.159-201ENST00000363674 87 ntBASIC2.57□□□□□ -2
MT-ND1P03886 SNORA68.1-201ENST00000364537 132 ntBASIC2.57□□□□□ -2
MT-ND1P03886 SET-203ENST00000372688 801 ntTSL 2 BASIC2.57□□□□□ -2
MT-ND1P03886 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
MT-ND1P03886 RNU5A-6P-201ENST00000384136 116 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RNU6-1042P-201ENST00000384204 107 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RNU6-74P-201ENST00000384235 107 ntBASIC2.57□□□□□ -2
MT-ND1P03886 MIR558-201ENST00000384920 94 ntBASIC2.57□□□□□ -2
MT-ND1P03886 MIR1-2-201ENST00000384961 85 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
MT-ND1P03886 AL122016.1-201ENST00000403365 367 ntBASIC2.57□□□□□ -2
MT-ND1P03886 GSTA9P-201ENST00000406231 611 ntBASIC2.57□□□□□ -2
MT-ND1P03886 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.57□□□□□ -2
MT-ND1P03886 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.57□□□□□ -2
MT-ND1P03886 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
MT-ND1P03886 RAC1P6-201ENST00000423911 575 ntBASIC2.57□□□□□ -2
MT-ND1P03886 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.57□□□□□ -2
MT-ND1P03886 AL513043.1-201ENST00000439124 535 ntBASIC2.57□□□□□ -2
MT-ND1P03886 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.57□□□□□ -2
MT-ND1P03886 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.57□□□□□ -2
MT-ND1P03886 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.57□□□□□ -2
MT-ND1P03886 SNORD97-201ENST00000459187 142 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RPL7P49-201ENST00000471402 708 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RPS3AP17-201ENST00000472594 777 ntBASIC2.57□□□□□ -2
MT-ND1P03886 AC026427.2-201ENST00000506228 536 ntBASIC2.57□□□□□ -2
MT-ND1P03886 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
MT-ND1P03886 AC002456.2-201ENST00000509356 380 ntBASIC2.57□□□□□ -2
MT-ND1P03886 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.57□□□□□ -2
MT-ND1P03886 RNU6-927P-201ENST00000516199 100 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RNU6-1092P-201ENST00000516955 87 ntBASIC2.57□□□□□ -2
MT-ND1P03886 RNA5SP290-201ENST00000517133 127 ntBASIC2.57□□□□□ -2
MT-ND1P03886 FAM92A1P1-201ENST00000528023 890 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms