Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL161734.1-201ENST00000609720 557 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFBP01127 Z69908.1-201ENST00000622603 247 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFBP01127 AL137003.2-201ENST00000606924 2538 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 HSPA8P4-201ENST00000511877 1920 ntBASIC2.72□□□□□ -1.97
PDGFBP01127 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
PDGFBP01127 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.71□□□□□ -1.98
PDGFBP01127 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDGFBP01127 RNU5A-8P-201ENST00000364102 114 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 RNU5A-2P-201ENST00000384337 116 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PDGFBP01127 SNORA40.3-201ENST00000390964 122 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 Y_RNA.608-201ENST00000410647 95 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 RPL19P1-201ENST00000411635 428 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.71□□□□□ -1.98
PDGFBP01127 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFBP01127 ELOCP14-201ENST00000428070 331 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC119618.1-201ENST00000434191 222 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 MTND1P28-201ENST00000435623 950 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 MTCO2P16-201ENST00000436962 677 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 ELOCP7-201ENST00000439968 331 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC005094.1-201ENST00000440420 368 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 RPL23AP20-201ENST00000447965 421 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDGFBP01127 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC105252.1-201ENST00000503089 286 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC117522.3-201ENST00000507974 584 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC022447.1-201ENST00000515358 464 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.71□□□□□ -1.98
PDGFBP01127 AP002453.2-201ENST00000533503 320 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 OR11H5P-201ENST00000554039 926 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC009977.1-201ENST00000586015 570 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 AC110760.3-201ENST00000598794 467 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 SEPT7P9-203ENST00000604116 343 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AL358072.1-201ENST00000604156 575 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 MTND4LP5-201ENST00000605152 292 ntBASIC2.71□□□□□ -1.98
PDGFBP01127 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFBP01127 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFBP01127 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFBP01127 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFBP01127 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFBP01127 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDGFBP01127 RNU6-1284P-201ENST00000363701 100 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 RNU6-750P-201ENST00000390946 107 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AL359634.1-202ENST00000404721 284 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 Y_RNA.598-201ENST00000410480 95 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 RN7SKP58-201ENST00000411010 305 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 RPL26P27-201ENST00000414397 437 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFBP01127 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFBP01127 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFBP01127 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AL589872.1-201ENST00000426602 288 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFBP01127 AC112220.1-201ENST00000434628 355 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC098831.1-201ENST00000440661 216 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFBP01127 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFBP01127 AC009961.3-201ENST00000449832 765 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFBP01127 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFBP01127 FABP5P5-201ENST00000515537 406 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFBP01127 AL356057.1-201ENST00000533798 831 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFBP01127 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC008277.2-201ENST00000605196 797 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC013562.2-201ENST00000611632 603 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC009878.1-201ENST00000621819 340 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
PDGFBP01127 ZNF72P-201ENST00000425869 1908 ntBASIC2.7□□□□□ -1.98
PDGFBP01127 AC110491.1-201ENST00000562191 2010 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFBP01127 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
PDGFBP01127 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFBP01127 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDGFBP01127 Y_RNA.4-201ENST00000362333 112 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 SNORD62.1-201ENST00000362541 86 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 RNU6-1167P-201ENST00000363227 94 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 Y_RNA.201-201ENST00000364052 96 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 RNU6-461P-201ENST00000364195 107 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 SNORA51.4-201ENST00000364993 124 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 RNU6-701P-201ENST00000384059 107 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
PDGFBP01127 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.69□□□□□ -1.98
PDGFBP01127 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms