Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC005261.5-201ENST00000596280 355 ntBASIC4.62□□□□□ -1.67
RAPGEF3O95398 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.62□□□□□ -1.67
RAPGEF3O95398 Y_RNA.231-201ENST00000364358 102 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 RNU6-701P-201ENST00000384059 107 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 MIR3074-201ENST00000384885 81 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 MIR514A2-201ENST00000385131 88 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 MIR514A3-201ENST00000385132 88 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC020550.1-201ENST00000447385 163 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 RPL37P4-201ENST00000448908 268 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 MTND3P16-201ENST00000452205 344 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 SNRPFP3-201ENST00000457792 225 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC083906.5-201ENST00000503722 328 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC004062.1-201ENST00000509926 645 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC107934.2-201ENST00000518653 310 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.61□□□□□ -1.67
RAPGEF3O95398 AC007619.2-201ENST00000605743 379 ntBASIC4.61□□□□□ -1.67
RAPGEF3O95398 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAPGEF3O95398 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 USP8P1-201ENST00000494673 3183 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 SNORA36C-201ENST00000384289 132 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 Y_RNA.576-201ENST00000384781 102 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 MIR93-201ENST00000385024 80 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 MIR607-201ENST00000385241 96 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL606923.1-201ENST00000406616 190 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 RNU4-46P-201ENST00000410818 138 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 ARL5AP1-201ENST00000418991 388 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC008850.1-201ENST00000427546 362 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 ERLEC1P1-201ENST00000433806 578 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL118520.1-201ENST00000450770 291 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 RPL21P104-201ENST00000464143 478 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC128713.1-201ENST00000471495 306 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC098591.2-201ENST00000510152 315 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 RN7SKP258-201ENST00000517151 304 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AP006587.4-201ENST00000526053 529 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 RANP3-201ENST00000530970 276 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC109635.4-202ENST00000531666 412 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC006270.2-201ENST00000578523 652 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 AC008638.3-201ENST00000603341 463 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL139395.1-201ENST00000603662 160 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 AL365204.3-201ENST00000612448 685 ntBASIC4.6□□□□□ -1.67
RAPGEF3O95398 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAPGEF3O95398 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAPGEF3O95398 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAPGEF3O95398 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAPGEF3O95398 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 DEFB108F-201ENST00000344638 222 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 SNORA31-201ENST00000362607 130 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RNU6-1287P-201ENST00000362914 107 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RNU6-1060P-201ENST00000384664 107 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 MT-TD-201ENST00000387419 68 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RNU6-332P-201ENST00000391193 108 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AL592148.1-201ENST00000413568 445 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC093106.2-201ENST00000428212 385 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 MTND3P23-201ENST00000431980 347 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 NEFMP1-201ENST00000443423 1006 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 AL162395.1-201ENST00000457882 422 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 HSPE1P6-201ENST00000479457 291 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC104806.1-201ENST00000508720 308 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RNA5SP154-201ENST00000516193 111 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 RNU6-685P-201ENST00000517088 95 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.59□□□□□ -1.67
RAPGEF3O95398 MIR4424-201ENST00000585257 86 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC073544.1-201ENST00000600110 1595 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 AC100810.6-201ENST00000638068 285 ntBASIC4.59□□□□□ -1.67
RAPGEF3O95398 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
RAPGEF3O95398 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.58□□□□□ -1.68
RAPGEF3O95398 RNU6-845P-201ENST00000362578 103 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 Y_RNA.166-201ENST00000363730 102 ntBASIC4.58□□□□□ -1.68
RAPGEF3O95398 Y_RNA.263-201ENST00000364659 114 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms