Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC093151.1-201ENST00000427711 313 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 RPS15AP10-201ENST00000432472 382 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF40AO75400 RPL23AP52-201ENST00000439311 478 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 ANP32BP2-201ENST00000454525 545 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 RPL12P25-201ENST00000455592 494 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 RNU6-1037P-201ENST00000459571 107 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 RN7SL385P-201ENST00000468873 276 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF40AO75400 AC139453.3-201ENST00000493276 369 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 AC021146.2-201ENST00000504736 556 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40AO75400 TRAV32-201ENST00000553993 340 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
PRPF40AO75400 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.8□□□□□ -1.64
PRPF40AO75400 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.8□□□□□ -1.64
PRPF40AO75400 AC004805.2-201ENST00000605382 482 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF40AO75400 uc_338.13-201ENST00000618243 179 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.8□□□□□ -1.64
PRPF40AO75400 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF40AO75400 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF40AO75400 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRPF40AO75400 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40AO75400 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PRPF40AO75400 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 RNA5SP322-201ENST00000363617 119 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RNY1P14-201ENST00000384426 108 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF40AO75400 RNA5SP129-201ENST00000410276 118 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RNU4-6P-201ENST00000410804 122 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RNU6-55P-201ENST00000411092 107 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF40AO75400 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF40AO75400 AC008267.5-201ENST00000424928 265 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC087650.1-201ENST00000431445 468 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RPS6P12-201ENST00000432491 726 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC091390.1-201ENST00000433904 331 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 BTF3P15-201ENST00000455606 336 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC011276.1-201ENST00000469688 323 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AL135752.1-201ENST00000479477 471 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC068781.1-201ENST00000488231 618 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RN7SL810P-201ENST00000493031 276 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 RNU6-572P-201ENST00000516724 80 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 MIR4273-201ENST00000582824 84 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF40AO75400 AC006023.2-201ENST00000609916 167 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 AC099506.2-201ENST00000623074 221 ntBASIC4.79□□□□□ -1.64
PRPF40AO75400 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF40AO75400 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF40AO75400 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40AO75400 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 MIR325-201ENST00000385260 98 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 RNU6-1197P-201ENST00000391183 107 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 SNORA40C-201ENST00000391285 128 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40AO75400 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 AL158071.1-201ENST00000430315 461 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 SNRPEP9-201ENST00000436794 238 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AL078601.1-201ENST00000444542 271 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 GSTA11P-201ENST00000452866 669 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 RPL23AP24-201ENST00000458203 385 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC015911.1-201ENST00000495111 156 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40AO75400 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 RNU6-120P-201ENST00000516077 103 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 RNA5SP468-201ENST00000516782 93 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 RNU6-1137P-201ENST00000517073 99 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40AO75400 HMGB1P14-201ENST00000557424 591 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40AO75400 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.78□□□□□ -1.64
PRPF40AO75400 AC008121.1-201ENST00000603244 268 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 AC018889.1-201ENST00000605372 397 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 Z69720.2-201ENST00000624755 279 ntBASIC4.78□□□□□ -1.64
PRPF40AO75400 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRPF40AO75400 LINC02471-203ENST00000641941 4752 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
PRPF40AO75400 RNU6-1309P-201ENST00000363305 108 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 RNA5SP509-201ENST00000364577 119 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AL133412.1-201ENST00000380194 2992 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AL513475.1-201ENST00000406602 315 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 RNA5SP36-201ENST00000410197 133 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 CRYBB2P1-203ENST00000415709 538 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 AC243428.1-201ENST00000421099 264 ntBASIC4.77□□□□□ -1.65
PRPF40AO75400 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.77□□□□□ -1.65
PRPF40AO75400 AC006946.1-201ENST00000429106 328 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms