Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NACAP2-201ENST00000318548 624 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 RNU6-451P-201ENST00000362921 107 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 RNU6-140P-201ENST00000384566 108 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CTNND1O60716 SNORD37.1-201ENST00000390968 65 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 AC012498.1-201ENST00000424037 437 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNND1O60716 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNND1O60716 SETP5-201ENST00000437270 562 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNND1O60716 AL590664.1-201ENST00000448065 339 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 SSXP4-201ENST00000451349 245 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNND1O60716 RPL31P58-201ENST00000469001 379 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNND1O60716 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNND1O60716 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNND1O60716 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNND1O60716 AC008962.1-201ENST00000605729 304 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 RMST_8.1-201ENST00000610287 165 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 RIOK3P1-201ENST00000418778 1528 ntBASIC3.88□□□□□ -1.79
CTNND1O60716 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNND1O60716 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNND1O60716 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
CTNND1O60716 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTNND1O60716 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNND1O60716 AL079305.1-201ENST00000623159 3008 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CTNND1O60716 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTNND1O60716 MIR422A-201ENST00000362286 90 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 RNU6-1283P-201ENST00000365314 105 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTNND1O60716 RNU6-217P-201ENST00000384164 104 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AL606923.1-201ENST00000406616 190 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 RNU6-193P-201ENST00000410977 107 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNND1O60716 ZNF863P-201ENST00000426746 417 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 AL353705.1-201ENST00000433468 480 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNND1O60716 RNU7-180P-201ENST00000459240 63 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 RPS29P25-201ENST00000481709 171 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNND1O60716 AC006445.2-201ENST00000510061 472 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC090136.1-201ENST00000520009 240 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.87□□□□□ -1.79
CTNND1O60716 SUB1P1-201ENST00000524415 382 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AL137161.1-201ENST00000532231 390 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNND1O60716 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 HMGB1P14-201ENST00000557424 591 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 MIR1273C-201ENST00000578669 77 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 LARP7P3-201ENST00000579888 337 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AL451007.1-201ENST00000595491 289 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC004805.2-201ENST00000605382 482 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 AC068831.7-201ENST00000616954 363 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNND1O60716 AL136164.4-201ENST00000625013 2135 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 U6.98-201ENST00000637157 84 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 AC024614.3-201ENST00000637860 256 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTNND1O60716 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTNND1O60716 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTNND1O60716 ASNSP3-201ENST00000451989 1306 ntBASIC3.87□□□□□ -1.79
CTNND1O60716 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CTNND1O60716 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CTNND1O60716 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTNND1O60716 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.86□□□□□ -1.79
CTNND1O60716 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.86□□□□□ -1.79
CTNND1O60716 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CTNND1O60716 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CTNND1O60716 AL139039.1-201ENST00000401900 692 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.86□□□□□ -1.79
CTNND1O60716 OR9R1P-201ENST00000412200 877 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.86□□□□□ -1.79
CTNND1O60716 HMGB3P11-201ENST00000440127 604 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 AC008264.1-201ENST00000447612 367 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 RPL23AP11-201ENST00000475260 469 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.86□□□□□ -1.79
CTNND1O60716 RPL7P47-201ENST00000497299 556 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.86□□□□□ -1.79
CTNND1O60716 RPL38P4-201ENST00000502376 214 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 SUMO2P6-201ENST00000505273 288 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 RNU4-29P-201ENST00000515943 174 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 MTND4P7-201ENST00000523876 130 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.86□□□□□ -1.79
CTNND1O60716 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.86□□□□□ -1.79
CTNND1O60716 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.86□□□□□ -1.79
CTNND1O60716 MIR3609-201ENST00000582661 80 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.86□□□□□ -1.79
CTNND1O60716 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.86□□□□□ -1.79
CTNND1O60716 AL157817.1-201ENST00000614264 790 ntBASIC3.86□□□□□ -1.79
CTNND1O60716 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms