Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC012493.2-201ENST00000595083 291 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC012557.2-201ENST00000605919 418 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC126118.1-201ENST00000607744 628 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC017083.3-201ENST00000609955 700 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AP001486.3-201ENST00000615334 372 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC068792.1-201ENST00000621354 417 ntBASIC2.9□□□□□ -1.95
SSX4O60224 AC005609.4-201ENST00000625071 447 ntBASIC2.9□□□□□ -1.95
SSX4O60224 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.9□□□□□ -1.95
SSX4O60224 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.9□□□□□ -1.95
SSX4O60224 U2.21-201ENST00000637295 81 ntBASIC2.9□□□□□ -1.95
SSX4O60224 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SSX4O60224 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SSX4O60224 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.89□□□□□ -1.95
SSX4O60224 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 OR4G2P-201ENST00000328113 903 ntBASIC2.89□□□□□ -1.95
SSX4O60224 Y_RNA.381-201ENST00000365666 102 ntBASIC2.89□□□□□ -1.95
SSX4O60224 RNU6-1029P-201ENST00000384109 107 ntBASIC2.89□□□□□ -1.95
SSX4O60224 SNORA48.5-201ENST00000391143 135 ntBASIC2.89□□□□□ -1.95
SSX4O60224 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSX4O60224 RNA5SP111-201ENST00000411386 101 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.89□□□□□ -1.95
SSX4O60224 HMGN2P30-201ENST00000423237 256 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AL160275.3-201ENST00000423876 471 ntBASIC2.89□□□□□ -1.95
SSX4O60224 SKA2P1-201ENST00000425592 390 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.89□□□□□ -1.95
SSX4O60224 RPL23AP20-201ENST00000447965 421 ntBASIC2.89□□□□□ -1.95
SSX4O60224 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.89□□□□□ -1.95
SSX4O60224 RPL26P9-201ENST00000457466 433 ntBASIC2.89□□□□□ -1.95
SSX4O60224 SNORA59A-201ENST00000459326 152 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AC104472.2-201ENST00000469035 601 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
SSX4O60224 RNU1-103P-201ENST00000516502 125 ntBASIC2.89□□□□□ -1.95
SSX4O60224 RNU6-506P-201ENST00000516553 94 ntBASIC2.89□□□□□ -1.95
SSX4O60224 RNA5SP503-201ENST00000517047 117 ntBASIC2.89□□□□□ -1.95
SSX4O60224 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.89□□□□□ -1.95
SSX4O60224 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
SSX4O60224 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.89□□□□□ -1.95
SSX4O60224 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
SSX4O60224 OR5BN1P-201ENST00000532955 829 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.89□□□□□ -1.95
SSX4O60224 CKAP2P1-201ENST00000555477 2049 ntBASIC2.89□□□□□ -1.95
SSX4O60224 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.89□□□□□ -1.95
SSX4O60224 HMGN2P15-201ENST00000585707 270 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.89□□□□□ -1.95
SSX4O60224 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.89□□□□□ -1.95
SSX4O60224 Z83843.1-201ENST00000604070 3685 ntBASIC2.89□□□□□ -1.95
SSX4O60224 NUTF2P8-201ENST00000604593 363 ntBASIC2.89□□□□□ -1.95
SSX4O60224 YPEL5P2-201ENST00000605553 359 ntBASIC2.89□□□□□ -1.95
SSX4O60224 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
SSX4O60224 AC139792.3-201ENST00000623525 224 ntBASIC2.89□□□□□ -1.95
SSX4O60224 SCARNA15.3-201ENST00000626315 122 ntBASIC2.89□□□□□ -1.95
SSX4O60224 SCARNA4.1-201ENST00000628597 123 ntBASIC2.89□□□□□ -1.95
SSX4O60224 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.89□□□□□ -1.95
SSX4O60224 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SSX4O60224 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SSX4O60224 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
SSX4O60224 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.88□□□□□ -1.95
SSX4O60224 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.88□□□□□ -1.95
SSX4O60224 MTND4P35-201ENST00000604257 1375 ntBASIC2.88□□□□□ -1.95
SSX4O60224 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SSX4O60224 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX4O60224 RNU6-1287P-201ENST00000362914 107 ntBASIC2.88□□□□□ -1.95
SSX4O60224 RNU6-778P-201ENST00000363269 103 ntBASIC2.88□□□□□ -1.95
SSX4O60224 RNA5SP197-201ENST00000363357 119 ntBASIC2.88□□□□□ -1.95
SSX4O60224 CD24P4-201ENST00000382840 243 ntBASIC2.88□□□□□ -1.95
SSX4O60224 RNU6-1215P-201ENST00000384441 102 ntBASIC2.88□□□□□ -1.95
SSX4O60224 RNU6-1060P-201ENST00000384664 107 ntBASIC2.88□□□□□ -1.95
SSX4O60224 CALM2P3-201ENST00000400429 449 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL591416.1-201ENST00000404015 867 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 UBE2V1P10-201ENST00000414685 269 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC063979.1-201ENST00000415539 377 ntBASIC2.88□□□□□ -1.95
SSX4O60224 MTCO1P21-201ENST00000416634 589 ntBASIC2.88□□□□□ -1.95
SSX4O60224 MTCYBP5-201ENST00000423752 1135 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.88□□□□□ -1.95
SSX4O60224 AL671855.1-201ENST00000446875 1203 ntBASIC2.88□□□□□ -1.95
SSX4O60224 PSPHP1-201ENST00000450062 261 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC027673.1-201ENST00000456245 405 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AL356010.1-201ENST00000456364 102 ntBASIC2.88□□□□□ -1.95
SSX4O60224 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 RNU7-23P-201ENST00000459465 62 ntBASIC2.88□□□□□ -1.95
SSX4O60224 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 RN7SL504P-201ENST00000494496 287 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.88□□□□□ -1.95
SSX4O60224 AC117522.3-201ENST00000507974 584 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX4O60224 SNORA31.21-201ENST00000517180 77 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC009902.1-201ENST00000519351 183 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AP001893.2-201ENST00000526949 202 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AP003034.1-201ENST00000534621 422 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC016957.1-201ENST00000534895 309 ntBASIC2.88□□□□□ -1.95
SSX4O60224 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms