Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR561-201ENST00000385216 97 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 EIF1AXP1-201ENST00000419267 435 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 RPL23AP6-201ENST00000446637 472 ntBASIC1.7□□□□□ -2.14
SGCEO43556 MTCO2P25-201ENST00000447065 681 ntBASIC1.7□□□□□ -2.14
SGCEO43556 TPT1P14-201ENST00000448018 505 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 TRBV12-1-201ENST00000479785 344 ntBASIC1.7□□□□□ -2.14
SGCEO43556 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
SGCEO43556 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SGCEO43556 AC107953.1-201ENST00000522216 297 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.7□□□□□ -2.14
SGCEO43556 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.7□□□□□ -2.14
SGCEO43556 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SGCEO43556 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.7□□□□□ -2.14
SGCEO43556 AC012213.3-201ENST00000577199 777 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.7□□□□□ -2.14
SGCEO43556 AC104763.2-201ENST00000604179 382 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC090186.1-201ENST00000605991 572 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC124016.2-201ENST00000610058 665 ntBASIC1.7□□□□□ -2.14
SGCEO43556 OR1S1-201ENST00000624470 978 ntBASIC1.7□□□□□ -2.14
SGCEO43556 AC110994.2-201ENST00000635481 492 ntBASIC1.7□□□□□ -2.14
SGCEO43556 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SGCEO43556 AC092881.1-201ENST00000638218 2733 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AL356432.1-201ENST00000405809 419 ntBASIC1.69□□□□□ -2.14
SGCEO43556 RNU2-2P-201ENST00000410396 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AL353621.1-201ENST00000418219 243 ntBASIC1.69□□□□□ -2.14
SGCEO43556 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.69□□□□□ -2.14
SGCEO43556 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AC096920.1-201ENST00000423991 241 ntBASIC1.69□□□□□ -2.14
SGCEO43556 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.69□□□□□ -2.14
SGCEO43556 ELOCP30-201ENST00000447108 299 ntBASIC1.69□□□□□ -2.14
SGCEO43556 FABP5P13-201ENST00000452144 328 ntBASIC1.69□□□□□ -2.14
SGCEO43556 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SGCEO43556 AC113347.3-201ENST00000509113 148 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SGCEO43556 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.69□□□□□ -2.14
SGCEO43556 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SGCEO43556 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.69□□□□□ -2.14
SGCEO43556 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
SGCEO43556 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SGCEO43556 AC060771.1-201ENST00000582031 164 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.69□□□□□ -2.14
SGCEO43556 AL031274.2-201ENST00000599419 203 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AC243960.4-201ENST00000600532 288 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.15-201ENST00000611544 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.16-201ENST00000613119 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.12-201ENST00000613778 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.20-201ENST00000613956 192 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.9-201ENST00000615427 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.11-201ENST00000616345 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.2-201ENST00000616535 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.3-201ENST00000617785 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.19-201ENST00000618602 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 RNU2-1-201ENST00000618664 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.6-201ENST00000619225 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.5-201ENST00000619465 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 U2.10-201ENST00000620268 191 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AP000943.4-201ENST00000622912 357 ntBASIC1.69□□□□□ -2.14
SGCEO43556 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
SGCEO43556 AP000676.3-201ENST00000623299 569 ntBASIC1.69□□□□□ -2.14
SGCEO43556 AC097655.1-201ENST00000635075 318 ntBASIC1.69□□□□□ -2.14
SGCEO43556 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.69□□□□□ -2.14
SGCEO43556 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.69□□□□□ -2.14
SGCEO43556 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.68□□□□□ -2.14
SGCEO43556 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SGCEO43556 UBE2L2-201ENST00000254302 429 ntBASIC1.68□□□□□ -2.14
SGCEO43556 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
SGCEO43556 RNU6-234P-201ENST00000365229 104 ntBASIC1.68□□□□□ -2.14
SGCEO43556 SNORA70B-201ENST00000384210 135 ntBASIC1.68□□□□□ -2.14
SGCEO43556 MIR95-201ENST00000385072 81 ntBASIC1.68□□□□□ -2.14
SGCEO43556 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.68□□□□□ -2.14
SGCEO43556 SNORD56-201ENST00000413522 71 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.68□□□□□ -2.14
SGCEO43556 AL158823.1-201ENST00000418441 478 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL953862.1-201ENST00000423016 168 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AC104651.1-201ENST00000427559 735 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 AL353706.1-201ENST00000436728 494 ntBASIC1.68□□□□□ -2.14
SGCEO43556 RPS15AP9-201ENST00000439856 381 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 MTATP6P30-201ENST00000443540 664 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 PAXBP1P1-201ENST00000449315 447 ntBASIC1.68□□□□□ -2.14
SGCEO43556 snoU109.1-201ENST00000459339 135 ntBASIC1.68□□□□□ -2.14
SGCEO43556 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.68□□□□□ -2.14
SGCEO43556 AC079203.1-201ENST00000487972 404 ntBASIC1.68□□□□□ -2.14
SGCEO43556 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AC093281.2-201ENST00000510153 597 ntBASIC1.68□□□□□ -2.14
SGCEO43556 RPL23AP94-201ENST00000512518 302 ntBASIC1.68□□□□□ -2.14
SGCEO43556 RNU6-581P-201ENST00000516214 105 ntBASIC1.68□□□□□ -2.14
SGCEO43556 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.68□□□□□ -2.14
SGCEO43556 OR5AL2P-201ENST00000532185 920 ntBASIC1.68□□□□□ -2.14
SGCEO43556 LRRC6P1-201ENST00000532188 885 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AC079598.5-201ENST00000547460 117 ntBASIC1.68□□□□□ -2.14
SGCEO43556 AL133153.1-201ENST00000557756 303 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms