Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNA5SP465-201ENST00000391195 109 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AL590084.1-201ENST00000407885 387 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC078974.1-201ENST00000411597 223 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 UBE2V1P4-201ENST00000425374 344 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC118469.1-201ENST00000442943 488 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 FCF1P6-201ENST00000456841 595 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AL441985.1-201ENST00000457727 251 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC114981.1-201ENST00000503897 678 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGB3O15347 AC108043.1-201ENST00000512696 574 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AP003497.1-201ENST00000528472 562 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.21□□□□□ -2.22
HMGB3O15347 AL512310.1-201ENST00000548639 172 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.21□□□□□ -2.22
HMGB3O15347 ADAM3B-201ENST00000569937 840 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGB3O15347 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.21□□□□□ -2.22
HMGB3O15347 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 AC093673.2-201ENST00000609674 331 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 TUG1_2.1-201ENST00000614234 87 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC138627.2-201ENST00000624202 601 ntBASIC1.21□□□□□ -2.22
HMGB3O15347 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.21□□□□□ -2.22
HMGB3O15347 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HMGB3O15347 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 AC006026.1-201ENST00000444025 1803 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 UBE2L2-201ENST00000254302 429 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 RNU6-650P-201ENST00000365658 111 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 MIR30A-201ENST00000385092 71 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 MIR29C-201ENST00000385231 88 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 SNORA3.2-201ENST00000408221 125 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 MTND1P21-201ENST00000412991 285 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC092634.2-201ENST00000428146 1010 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC006946.1-201ENST00000429106 328 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 HMGN2P3-201ENST00000433603 273 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 ZFAND6P1-201ENST00000434138 605 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 HMGN2P5-201ENST00000436882 273 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AP000949.1-201ENST00000438328 629 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 BX322784.1-201ENST00000455793 1077 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGB3O15347 AC010468.3-201ENST00000508225 458 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGB3O15347 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.2□□□□□ -2.22
HMGB3O15347 ZNF92P2-201ENST00000600543 1059 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 ELOCP5-201ENST00000604924 333 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 PRR13P7-201ENST00000605538 430 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGB3O15347 BX248123.2-201ENST00000606318 124 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC100814.1-201ENST00000606963 623 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGB3O15347 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AL357080.1-201ENST00000617394 239 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC008121.3-201ENST00000618726 433 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 AC091304.6-201ENST00000619761 202 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.2□□□□□ -2.22
HMGB3O15347 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.2□□□□□ -2.22
HMGB3O15347 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.2□□□□□ -2.22
HMGB3O15347 NACAP2-201ENST00000318548 624 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 MIR424-201ENST00000362227 98 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 RNU4-82P-201ENST00000362443 140 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 RNU6-658P-201ENST00000384606 106 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 TPMTP2-201ENST00000414372 726 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC074117.2-201ENST00000417130 397 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC244035.1-201ENST00000430042 390 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.19□□□□□ -2.22
HMGB3O15347 RPL7P54-201ENST00000438336 674 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 HSPE1P24-201ENST00000450782 238 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGB3O15347 SSXP1-201ENST00000453640 473 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGB3O15347 AC006512.1-201ENST00000468816 291 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC010486.1-201ENST00000511793 424 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 MTND5P13-201ENST00000513046 1079 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 RNU6-581P-201ENST00000516214 105 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
HMGB3O15347 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGB3O15347 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.19□□□□□ -2.22
HMGB3O15347 EEF1A1P37-201ENST00000522748 715 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 OR5B19P-201ENST00000531766 928 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.19□□□□□ -2.22
HMGB3O15347 PSMA3P-201ENST00000555485 635 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC044913.1-201ENST00000557200 430 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HMGB3O15347 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGB3O15347 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.19□□□□□ -2.22
HMGB3O15347 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.19□□□□□ -2.22
HMGB3O15347 AC021646.1-201ENST00000605469 484 ntBASIC1.19□□□□□ -2.22
HMGB3O15347 NDUFA8P1-201ENST00000605525 367 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms