Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC074050.1-201ENST00000563247 211 ntBASIC2.93□□□□□ -1.94
TO15178 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 MIR4775-201ENST00000581168 75 ntBASIC2.93□□□□□ -1.94
TO15178 AC008521.1-201ENST00000587471 187 ntBASIC2.93□□□□□ -1.94
TO15178 AC010620.2-201ENST00000600135 313 ntBASIC2.93□□□□□ -1.94
TO15178 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.93□□□□□ -1.94
TO15178 AC007179.3-201ENST00000604976 235 ntBASIC2.93□□□□□ -1.94
TO15178 MIR15A-201ENST00000607334 83 ntBASIC2.93□□□□□ -1.94
TO15178 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.93□□□□□ -1.94
TO15178 AC017083.3-201ENST00000609955 700 ntBASIC2.93□□□□□ -1.94
TO15178 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
TO15178 AC099506.2-201ENST00000623074 221 ntBASIC2.93□□□□□ -1.94
TO15178 AL512643.1-201ENST00000635735 524 ntBASIC2.93□□□□□ -1.94
TO15178 Z99571.1-201ENST00000636677 394 ntBASIC2.93□□□□□ -1.94
TO15178 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.93□□□□□ -1.94
TO15178 MIR622-201ENST00000638396 96 ntBASIC2.93□□□□□ -1.94
TO15178 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
TO15178 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TO15178 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TO15178 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
TO15178 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
TO15178 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
TO15178 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.92□□□□□ -1.94
TO15178 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
TO15178 SNORD46.1-201ENST00000364139 104 ntBASIC2.92□□□□□ -1.94
TO15178 SNORD115-7-201ENST00000365306 82 ntBASIC2.92□□□□□ -1.94
TO15178 Y_RNA.481-201ENST00000384373 102 ntBASIC2.92□□□□□ -1.94
TO15178 RNU6-1215P-201ENST00000384441 102 ntBASIC2.92□□□□□ -1.94
TO15178 MIR888-201ENST00000401186 77 ntBASIC2.92□□□□□ -1.94
TO15178 FO393413.1-201ENST00000402892 195 ntBASIC2.92□□□□□ -1.94
TO15178 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.92□□□□□ -1.94
TO15178 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.92□□□□□ -1.94
TO15178 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
TO15178 AL356010.1-201ENST00000456364 102 ntBASIC2.92□□□□□ -1.94
TO15178 RN7SL863P-201ENST00000462370 296 ntBASIC2.92□□□□□ -1.94
TO15178 SRRM1P2-201ENST00000464531 1192 ntBASIC2.92□□□□□ -1.94
TO15178 AC006512.1-201ENST00000468816 291 ntBASIC2.92□□□□□ -1.94
TO15178 RPL9P33-201ENST00000484311 566 ntBASIC2.92□□□□□ -1.94
TO15178 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.92□□□□□ -1.94
TO15178 AC109927.2-201ENST00000506416 303 ntBASIC2.92□□□□□ -1.94
TO15178 AC105417.1-201ENST00000514691 285 ntBASIC2.92□□□□□ -1.94
TO15178 RNA5SP217-201ENST00000515959 91 ntBASIC2.92□□□□□ -1.94
TO15178 RNU1-143P-201ENST00000516296 146 ntBASIC2.92□□□□□ -1.94
TO15178 RNA5SP503-201ENST00000517047 117 ntBASIC2.92□□□□□ -1.94
TO15178 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TO15178 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.92□□□□□ -1.94
TO15178 AC019159.1-201ENST00000605094 187 ntBASIC2.92□□□□□ -1.94
TO15178 U1.23-201ENST00000610293 146 ntBASIC2.92□□□□□ -1.94
TO15178 AL591516.1-201ENST00000611326 274 ntBASIC2.92□□□□□ -1.94
TO15178 RNU1-68P-201ENST00000615382 146 ntBASIC2.92□□□□□ -1.94
TO15178 U1.39-201ENST00000621562 146 ntBASIC2.92□□□□□ -1.94
TO15178 AC139792.3-201ENST00000623525 224 ntBASIC2.92□□□□□ -1.94
TO15178 AC018692.3-201ENST00000623929 123 ntBASIC2.92□□□□□ -1.94
TO15178 AC008669.1-201ENST00000565823 2178 ntBASIC2.92□□□□□ -1.94
TO15178 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
TO15178 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
TO15178 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TO15178 U8.9-201ENST00000365667 134 ntBASIC2.91□□□□□ -1.94
TO15178 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TO15178 Y_RNA.576-201ENST00000384781 102 ntBASIC2.91□□□□□ -1.94
TO15178 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.91□□□□□ -1.94
TO15178 RN7SKP58-201ENST00000411010 305 ntBASIC2.91□□□□□ -1.94
TO15178 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.91□□□□□ -1.94
TO15178 BMS1P22-201ENST00000414726 313 ntBASIC2.91□□□□□ -1.94
TO15178 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
TO15178 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.91□□□□□ -1.94
TO15178 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.91□□□□□ -1.94
TO15178 AC027673.1-201ENST00000456245 405 ntBASIC2.91□□□□□ -1.94
TO15178 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.91□□□□□ -1.94
TO15178 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.91□□□□□ -1.94
TO15178 RBBP4P6-201ENST00000508098 202 ntBASIC2.91□□□□□ -1.94
TO15178 AC104806.1-201ENST00000508720 308 ntBASIC2.91□□□□□ -1.94
TO15178 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.91□□□□□ -1.94
TO15178 RNU6-685P-201ENST00000517088 95 ntBASIC2.91□□□□□ -1.94
TO15178 AC026241.1-201ENST00000517873 2142 ntBASIC2.91□□□□□ -1.94
TO15178 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.91□□□□□ -1.94
TO15178 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.91□□□□□ -1.94
TO15178 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
TO15178 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.91□□□□□ -1.94
TO15178 AL035413.2-201ENST00000604801 525 ntBASIC2.91□□□□□ -1.94
TO15178 AL670379.4-201ENST00000605279 254 ntBASIC2.91□□□□□ -1.94
TO15178 DUSP12P1-201ENST00000612874 516 ntBASIC2.91□□□□□ -1.94
TO15178 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.91□□□□□ -1.94
TO15178 AL359880.1-201ENST00000621879 266 ntBASIC2.91□□□□□ -1.94
TO15178 AC011155.2-201ENST00000623202 216 ntBASIC2.91□□□□□ -1.94
TO15178 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.91□□□□□ -1.94
TO15178 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.91□□□□□ -1.94
TO15178 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.9□□□□□ -1.94
TO15178 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TO15178 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
TO15178 ZNF519P1-201ENST00000449011 1626 ntBASIC2.9□□□□□ -1.94
TO15178 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.9□□□□□ -1.94
TO15178 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TO15178 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
TO15178 RNU6-1287P-201ENST00000362914 107 ntBASIC2.9□□□□□ -1.95
TO15178 SNORD56.3-201ENST00000363507 71 ntBASIC2.9□□□□□ -1.95
TO15178 SNORA38.1-201ENST00000364172 131 ntBASIC2.9□□□□□ -1.95
TO15178 RNU6-1180P-201ENST00000364935 107 ntBASIC2.9□□□□□ -1.95
TO15178 SNORA4.3-201ENST00000365564 137 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms