Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 RNU6-1120P-201ENST00000362988 108 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RNA5SP72-201ENST00000364442 117 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RNU6-946P-201ENST00000383878 107 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RNU6-331P-201ENST00000384724 107 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 MIR483-201ENST00000385070 76 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 RPS4XP3-201ENST00000398541 413 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM38O00635 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM38O00635 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM38O00635 Z82205.1-201ENST00000428456 297 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RPL23AP30-201ENST00000432419 501 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AL606489.2-201ENST00000433886 234 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 SETP5-201ENST00000437270 562 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 SSXP4-201ENST00000451349 245 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AL590639.1-201ENST00000456484 337 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AC116562.3-201ENST00000506136 177 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 MTND4LP22-201ENST00000508209 276 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM38O00635 RNA5SP401-201ENST00000515920 127 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 Y_RNA.691-201ENST00000516611 103 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 RNU6-677P-201ENST00000516914 101 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 SNORA70.24-201ENST00000517233 118 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 PSMA2P1-201ENST00000526365 646 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.69□□□□□ -1.82
TRIM38O00635 AC068587.5-201ENST00000528506 175 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 OR5BN1P-201ENST00000532955 829 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 HMGB1P14-201ENST00000557424 591 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AC103710.3-201ENST00000608157 948 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AP001486.3-201ENST00000615334 372 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 MIR7975-201ENST00000619350 68 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 AC027309.3-201ENST00000623419 351 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM38O00635 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM38O00635 AC073346.2-201ENST00000624724 2058 ntBASIC3.69□□□□□ -1.82
TRIM38O00635 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM38O00635 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-188P-201ENST00000364207 107 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 Y_RNA.259-201ENST00000364619 101 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 Y_RNA.315-201ENST00000365117 102 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-1318P-201ENST00000365389 103 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 SNORA32.2-201ENST00000384049 122 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-14P-201ENST00000384630 106 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNVU1-14-201ENST00000384770 164 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MIR454-201ENST00000390180 115 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-1158P-201ENST00000391167 107 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM38O00635 SOD2P1-201ENST00000396543 562 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL356057.3-201ENST00000402607 340 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RPL5P18-201ENST00000406671 891 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 Y_RNA.605-201ENST00000410577 105 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-373P-201ENST00000411247 98 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-387P-201ENST00000411331 105 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MTND3P8-201ENST00000412909 339 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC245054.2-201ENST00000415639 319 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC113618.1-201ENST00000416747 285 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MRPL50P2-201ENST00000416821 482 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM38O00635 AL358176.2-201ENST00000425769 204 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL159987.2-201ENST00000432754 307 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC236972.2-201ENST00000434979 310 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL590664.1-201ENST00000448065 339 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM38O00635 AL136097.1-201ENST00000456945 913 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 Y_RNA.631-201ENST00000459607 101 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC004801.2-202ENST00000463559 283 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MTND4P17-201ENST00000470444 350 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM38O00635 AC084357.1-201ENST00000473404 255 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC078785.3-201ENST00000476607 425 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC084198.1-201ENST00000477747 402 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL163540.1-201ENST00000485382 386 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 RNU6-1231P-201ENST00000517185 103 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM38O00635 BTF3P12-201ENST00000519620 469 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 CASP1P1-201ENST00000526345 212 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 OR4R1P-201ENST00000529879 463 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 OR5B10P-201ENST00000532869 642 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC087241.2-201ENST00000535801 324 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.68□□□□□ -1.82
TRIM38O00635 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM38O00635 AC026470.2-201ENST00000561492 181 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 MIR4742-201ENST00000581069 85 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TRIM38O00635 AL121992.2-201ENST00000606262 256 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 DISC2.1-201ENST00000612827 205 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL442067.1-201ENST00000613261 223 ntBASIC3.68□□□□□ -1.82
TRIM38O00635 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.68□□□□□ -1.82
TRIM38O00635 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM38O00635 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms