Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPS3AP12-201ENST00000443616 753 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC233279.1-201ENST00000455300 423 ntBASIC2.53□□□□□ -2
SLC28A1O00337 GZMAP1-201ENST00000503054 631 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC026427.2-201ENST00000506228 536 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC109927.2-201ENST00000506416 303 ntBASIC2.53□□□□□ -2
SLC28A1O00337 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A1O00337 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.53□□□□□ -2
SLC28A1O00337 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.53□□□□□ -2
SLC28A1O00337 AC118465.1-201ENST00000513820 1271 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A1O00337 Y_RNA.689-201ENST00000516589 107 ntBASIC2.53□□□□□ -2
SLC28A1O00337 RNU6-572P-201ENST00000516724 80 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC009902.1-201ENST00000519351 183 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A1O00337 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLC28A1O00337 AL158211.1-201ENST00000566763 763 ntBASIC2.53□□□□□ -2
SLC28A1O00337 MIR3117-201ENST00000584034 78 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A1O00337 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.53□□□□□ -2
SLC28A1O00337 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.53□□□□□ -2
SLC28A1O00337 AL442067.2-201ENST00000614033 363 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AC008250.2-201ENST00000615261 205 ntBASIC2.53□□□□□ -2
SLC28A1O00337 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.53□□□□□ -2
SLC28A1O00337 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SLC28A1O00337 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.53□□□□□ -2
SLC28A1O00337 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
SLC28A1O00337 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 SNORA4.3-201ENST00000365564 137 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 MIR9-1-201ENST00000385198 89 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 RPS3AP36-201ENST00000398190 775 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 HMGN1P14-201ENST00000412459 517 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AL592148.1-201ENST00000413568 445 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 NPM1P11-201ENST00000417106 855 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AC027673.1-201ENST00000456245 405 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 snoU13.22-201ENST00000459428 104 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 MTND3P7-201ENST00000474435 343 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 RNU2-46P-201ENST00000517038 113 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AC025755.1-201ENST00000521306 278 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AC022616.3-201ENST00000523940 148 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 OR5B19P-201ENST00000531766 928 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AL157871.3-201ENST00000557231 293 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 MIR3682-201ENST00000581338 84 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AC068276.1-201ENST00000605793 379 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 MIR15A-201ENST00000607334 83 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A1O00337 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 AL603839.4-201ENST00000624658 1005 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 CU459211.1-201ENST00000635667 749 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A1O00337 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC28A1O00337 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC28A1O00337 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A1O00337 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SLC28A1O00337 TEX21P-201ENST00000447107 1476 ntBASIC2.52□□□□□ -2.01
SLC28A1O00337 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC28A1O00337 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLC28A1O00337 SNORA20.2-201ENST00000383922 131 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 RNU6-641P-201ENST00000384006 107 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 MIR558-201ENST00000384920 94 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC28A1O00337 RNU6-1025P-201ENST00000410629 104 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AC127391.1-201ENST00000411737 98 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 USP9YP20-201ENST00000419224 558 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC28A1O00337 AC007560.1-201ENST00000426912 237 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 MED13P1-201ENST00000428342 171 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.51□□□□□ -2.01
SLC28A1O00337 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC28A1O00337 AL445687.1-201ENST00000439946 251 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 CACYBPP2-201ENST00000453625 678 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 SNRPGP9-201ENST00000456025 225 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 snoU109.1-201ENST00000459339 135 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 RAP1BP2-201ENST00000478270 544 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 EIF4EP3-201ENST00000498782 656 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC28A1O00337 SNORA31.19-201ENST00000517079 126 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.51□□□□□ -2.01
SLC28A1O00337 AC060788.1-201ENST00000521318 469 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AC005771.1-201ENST00000585581 349 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AC091152.3-201ENST00000604227 325 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AL133173.2-201ENST00000614270 90 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 AL359547.2-201ENST00000615810 418 ntBASIC2.51□□□□□ -2.01
SLC28A1O00337 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC28A1O00337 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms