Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RNU6-778P-201ENST00000363269 103 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 RNU4-1-201ENST00000363925 141 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 MIR34A-201ENST00000385130 110 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 SNORD88.1-201ENST00000408684 91 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AL139413.1-201ENST00000421309 217 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 SKA2P1-201ENST00000425592 390 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AL592045.1-201ENST00000429867 352 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 USP9YP15-201ENST00000442391 422 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 TAF9P1-201ENST00000445421 515 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AP000936.2-201ENST00000447151 681 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 DPPA3P1-201ENST00000448050 469 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 FABP5P15-201ENST00000453566 214 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 TAF9P2-201ENST00000454958 515 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC003982.1-202ENST00000469928 248 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC026801.1-201ENST00000497178 464 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AP003467.2-201ENST00000520175 319 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 HMGB1P41-201ENST00000520234 440 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC011979.2-201ENST00000527568 352 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 OSBPL9P5-201ENST00000542581 171 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 RPS3AP4-201ENST00000555161 764 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC023043.3-201ENST00000593113 385 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 BNIP3P8-201ENST00000597863 560 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AL358072.1-201ENST00000604156 575 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AL355598.1-201ENST00000604169 202 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC104763.2-201ENST00000604179 382 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AL049779.4-201ENST00000604500 156 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC135507.1-201ENST00000607214 561 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC025594.3-201ENST00000613068 790 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC078883.4-201ENST00000623218 367 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 AC025048.6-202ENST00000627667 438 ntBASIC2.47□□□□□ -2.01
NPIPA2E9PIF3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.01
NPIPA2E9PIF3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 SNORD56.2-201ENST00000363242 71 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 RNU6-301P-201ENST00000384277 107 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 MIR9-1-201ENST00000385198 89 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AL590004.2-201ENST00000404787 371 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 RNA5SP21-201ENST00000410917 96 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 RPS12P24-201ENST00000412619 387 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 ISCA1P1-201ENST00000426679 387 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 HMGB3P12-201ENST00000438745 556 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 OSTCP8-201ENST00000445117 448 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC009961.3-201ENST00000449832 765 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC093899.1-201ENST00000457984 376 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC098591.2-201ENST00000510152 315 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC022447.1-201ENST00000515358 464 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 RNU2-46P-201ENST00000517038 113 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 SNORA31.18-201ENST00000517043 134 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 BNIP3P9-201ENST00000603714 553 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC130324.3-201ENST00000614165 542 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC008250.2-201ENST00000615261 205 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 AC092608.2-201ENST00000624427 218 ntBASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPIPA2E9PIF3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RNU4-82P-201ENST00000362443 140 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RNY4P34-201ENST00000364779 95 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RNU6-946P-201ENST00000383878 107 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RNU6-39P-201ENST00000384344 107 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 MIR181B1-201ENST00000385240 110 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 RPS4XP7-201ENST00000406274 780 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 AC092809.3-201ENST00000415453 231 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 ELOCP4-201ENST00000420090 333 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.45□□□□□ -2.02
NPIPA2E9PIF3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms