Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 TPRKBP2-201ENST00000565969 475 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 MTATP6P3-201ENST00000581686 676 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AP001330.5-201ENST00000607176 411 ntBASIC3.17□□□□□ -1.9
LRRC53A6NM62 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.17□□□□□ -1.9
LRRC53A6NM62 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRRC53A6NM62 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRRC53A6NM62 SNORA63.1-201ENST00000362493 131 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RNU1-35P-201ENST00000362782 153 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 SNORA14A-201ENST00000364773 135 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 SAR1AP2-201ENST00000392696 594 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RPL17P50-201ENST00000396131 546 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RNU6-387P-201ENST00000411331 105 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RNA5SP111-201ENST00000411386 101 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL031779.1-201ENST00000415663 330 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL160275.3-201ENST00000423876 471 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 MTND3P21-201ENST00000433774 331 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RPL7P54-201ENST00000438336 674 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 DPPA3P1-201ENST00000448050 469 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 FDX1P2-201ENST00000450769 375 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL118520.1-201ENST00000450770 291 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 RNU7-63P-201ENST00000459054 62 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RPS15AP34-201ENST00000487776 387 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC006445.1-201ENST00000491925 405 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RN7SKP272-201ENST00000516988 232 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 AP003122.3-201ENST00000526316 255 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC084851.1-201ENST00000529105 249 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC104383.1-201ENST00000530297 370 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 RANP3-201ENST00000530970 276 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC019176.2-201ENST00000611579 315 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 AL359693.1-201ENST00000614959 2407 ntBASIC3.16□□□□□ -1.9
LRRC53A6NM62 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
LRRC53A6NM62 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
LRRC53A6NM62 AC027514.1-201ENST00000588561 1603 ntBASIC3.15□□□□□ -1.9
LRRC53A6NM62 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRRC53A6NM62 RNU6-1287P-201ENST00000362914 107 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-1085P-201ENST00000363576 107 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-116P-201ENST00000384042 109 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-198P-201ENST00000384258 104 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-1060P-201ENST00000384664 107 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-550P-201ENST00000391057 101 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 Y_RNA.619-201ENST00000410951 90 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 OR6C66P-201ENST00000414917 930 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AL158156.1-201ENST00000422509 473 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 MTCYBP8-201ENST00000422855 651 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 MTCYBP5-201ENST00000423752 1135 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 TIMM9P3-201ENST00000428659 274 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 MTND1P18-201ENST00000448191 573 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 AC126182.1-201ENST00000478134 357 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 RPS29P20-201ENST00000489592 171 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AP002812.1-201ENST00000495378 474 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AK6P1-201ENST00000540219 478 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 MIR4703-201ENST00000577728 79 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 MTND4LP5-201ENST00000605152 292 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 DUSP12P1-201ENST00000612874 516 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AL354950.2-201ENST00000617939 290 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AC068137.3-201ENST00000639191 341 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 AC073869.6-201ENST00000640656 341 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
LRRC53A6NM62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRRC53A6NM62 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 HSPA8P4-201ENST00000511877 1920 ntBASIC3.15□□□□□ -1.91
LRRC53A6NM62 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
LRRC53A6NM62 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms