Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 Z74021.1-201ENST00000423610 407 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 RPL21P91-201ENST00000429231 479 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AL358472.1-201ENST00000431295 329 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 RPL35AP21-201ENST00000437667 333 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 BRK1P2-201ENST00000442875 223 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AC107399.1-201ENST00000451226 265 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 MIR892C-201ENST00000516410 77 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 RNA5SP165-201ENST00000517142 115 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 IMMP1LP2-201ENST00000552954 492 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 AC007151.1-201ENST00000572774 483 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 MIR7112-201ENST00000616126 65 ntBASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC85CA6NKD9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 MIR548F5-201ENST00000408421 86 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 SKA2P1-201ENST00000425592 390 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.632-201ENST00000459189 102 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 MTND4P17-201ENST00000470444 350 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC097462.2-201ENST00000504623 481 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 YWHAEP4-201ENST00000505390 198 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 RNU6-323P-201ENST00000521915 107 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC022695.1-201ENST00000522089 237 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 MIR4790-201ENST00000577799 79 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC138761.3-201ENST00000579993 334 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC004805.2-201ENST00000605382 482 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AL160413.1-201ENST00000622780 310 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC099506.2-201ENST00000623074 221 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC027309.3-201ENST00000623419 351 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 AC100778.3-201ENST00000580060 1750 ntBASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC85CA6NKD9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RNU6-562P-201ENST00000362731 107 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RNA5SP307-201ENST00000362863 116 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.67-201ENST00000362870 100 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 SNORD14B-201ENST00000364533 90 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RNU6-384P-201ENST00000364900 104 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RNU6-140P-201ENST00000384566 108 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 MIR325-201ENST00000385260 98 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AL592148.1-201ENST00000413568 445 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AL121890.1-201ENST00000435457 205 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 FABP5P14-201ENST00000437273 393 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 SNORD105B-201ENST00000458770 79 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 SNORD19B-201ENST00000459623 84 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC026801.1-201ENST00000497178 464 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RPL39P5-202ENST00000512505 151 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 HMGB1P14-201ENST00000557424 591 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC016727.1-205ENST00000605437 569 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 FTX_3.1-201ENST00000610451 147 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 U2.21-201ENST00000637295 81 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 RPS4XP5-202ENST00000449995 1334 ntBASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC85CA6NKD9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 CUL1P1-201ENST00000509510 2425 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.58-201ENST00000362807 102 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 SNORD3E-201ENST00000362899 217 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 Y_RNA.154-201ENST00000363624 102 ntBASIC4.35□□□□□ -1.71
CCDC85CA6NKD9 RNY3P1-201ENST00000365085 102 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms