Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL161798.1-201ENST00000604630 131 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AL136363.1-201ENST00000605349 337 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC006338.1-201ENST00000618453 749 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC009831.4-201ENST00000620744 325 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
SMIM28A0A1B0GU29 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC022336.2-201ENST00000568966 2538 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-1180P-201ENST00000364935 107 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-701P-201ENST00000384059 107 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RN7SKP32-201ENST00000410167 303 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RPL17P12-201ENST00000413391 526 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AL365496.1-201ENST00000426885 215 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 MTND1P28-201ENST00000435623 950 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC129850.1-201ENST00000436203 508 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 ARPC3P1-201ENST00000437218 533 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 MTND1P30-201ENST00000441241 901 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC010095.1-201ENST00000443543 144 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 TAF9P1-201ENST00000445421 515 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 SSXP1-201ENST00000453640 473 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 TAF9P2-201ENST00000454958 515 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 RBM43P1-201ENST00000476891 1081 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 YWHAEP4-201ENST00000505390 198 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC112191.3-201ENST00000604371 277 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AL161729.4-201ENST00000604650 476 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC103710.1-201ENST00000610003 901 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 FTX_3.1-201ENST00000610451 147 ntBASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
SMIM28A0A1B0GU29 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC092447.7-201ENST00000422212 1621 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-1167P-201ENST00000363227 94 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 MT-TH-201ENST00000387441 69 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA26.8-201ENST00000391306 124 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AL021407.1-201ENST00000404531 386 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-193P-201ENST00000410977 107 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNU2-25P-201ENST00000411041 191 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 BX682237.1-201ENST00000415016 335 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RPS15AP12-201ENST00000419498 388 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 CYCSP46-201ENST00000423569 204 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC007283.2-201ENST00000424739 197 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC009414.1-201ENST00000427200 443 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 GTF2IP20-201ENST00000431663 360 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 UBE2D3P4-201ENST00000441973 436 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 COX6CP12-201ENST00000446748 202 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 USP9YP12-201ENST00000450481 570 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 MTND1P12-201ENST00000455231 147 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC013267.1-201ENST00000458227 267 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RAP1BP2-201ENST00000478270 544 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AL160314.1-201ENST00000490836 438 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 SUMO2P6-201ENST00000505273 288 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 FABP5P5-201ENST00000515537 406 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP290-201ENST00000517133 127 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNA5SP291-201ENST00000517222 105 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC012414.6-201ENST00000568241 401 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AL358072.1-201ENST00000604156 575 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC007363.1-201ENST00000604736 620 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 MTND4LP5-201ENST00000605152 292 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RPL23AP88-201ENST00000605759 454 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AL359198.2-201ENST00000611836 194 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMIM28A0A1B0GU29 RNU5E-1-201ENST00000362477 120 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SMIM11P1-201ENST00000369586 178 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 SNORA67.3-201ENST00000384366 140 ntBASIC2.35□□□□□ -2.03
SMIM28A0A1B0GU29 RNU6-278P-201ENST00000390945 109 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms