Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 LSM6P2-201ENST00000552208 177 ntBASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 AC090115.3-201ENST00000553218 849 ntBASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 VN1R80P-201ENST00000597126 338 ntBASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 DUSP12P1-201ENST00000612874 516 ntBASIC0.76□□□□□ -2.29
TRAV30A0A087WSZ9 MIR29C-201ENST00000385231 88 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 CST2P1-201ENST00000425770 87 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 USP9YP24-201ENST00000434374 697 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 MTCO2P20-201ENST00000437339 673 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AL161788.1-201ENST00000441805 169 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AL163540.1-201ENST00000485382 386 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AL133373.1-201ENST00000497098 94 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 MTCYBP16-201ENST00000509187 1129 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 HSPA8P13-201ENST00000523715 472 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AP000942.3-201ENST00000603702 160 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 SNRPGP17-201ENST00000603780 214 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AC010900.2-201ENST00000604508 210 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 AC004492.1-201ENST00000607036 742 ntBASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV30A0A087WSZ9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AL139098.1-201ENST00000407291 389 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AL135790.2-201ENST00000437701 267 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC092473.1-201ENST00000441098 221 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 FCF1P6-201ENST00000456841 595 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 NDUFA5P6-201ENST00000542110 379 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC079148.1-201ENST00000565944 819 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 MIR4524B-201ENST00000581569 115 ntBASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
TRAV30A0A087WSZ9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 Y_RNA.140-201ENST00000363474 103 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 RNU6-884P-201ENST00000363889 107 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 RNU6-741P-201ENST00000383889 107 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 BTF3P8-201ENST00000414577 526 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 LINC01347-201ENST00000417964 355 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AL512637.2-201ENST00000431287 1256 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 SUMO1P1-201ENST00000497904 306 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AC112198.4-201ENST00000515450 351 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 OR5B19P-201ENST00000531766 928 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AC005858.4-201ENST00000623191 700 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AC017104.5-201ENST00000637647 639 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 AL391516.1-201ENST00000554380 2449 ntBASIC0.73□□□□□ -2.29
TRAV30A0A087WSZ9 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 OR5T3-201ENST00000303059 1023 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 RNU6-271P-201ENST00000363858 105 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 MIR514A1-201ENST00000385133 98 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 BPY2DP-201ENST00000422208 265 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 THAP5P1-201ENST00000439089 262 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AC098831.1-201ENST00000440661 216 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AL049874.1-201ENST00000489560 388 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 SNORA48.11-201ENST00000517015 89 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AP006587.4-201ENST00000526053 529 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AL359212.1-201ENST00000556608 614 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AC097468.3-201ENST00000607956 456 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 FTX_3.1-201ENST00000610451 147 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AC090517.3-201ENST00000625170 141 ntBASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV30A0A087WSZ9 RNA5SP99-201ENST00000364020 114 ntBASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 RNU1-57P-201ENST00000384491 166 ntBASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 MIR135A2-201ENST00000384854 100 ntBASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 MIR95-201ENST00000385072 81 ntBASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 AC068135.1-201ENST00000446164 246 ntBASIC0.71□□□□□ -2.3
TRAV30A0A087WSZ9 AC104058.1-201ENST00000448028 297 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms