Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AL360157.1-201ENST00000565962 87 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 MIR486-1-201ENST00000612171 68 ntBASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHB1Q9Y5F3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-254P-201ENST00000363377 107 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 RNU6-395P-201ENST00000365662 106 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 MIR493-201ENST00000385254 89 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 RNU2-37P-201ENST00000410695 177 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 SYF2P2-201ENST00000417620 583 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC073063.1-201ENST00000434352 607 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 PIGFP3-201ENST00000441918 722 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 FABP5P15-201ENST00000453566 214 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 KC877373.1-201ENST00000479066 408 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 RPL30P5-201ENST00000494923 336 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC008716.1-201ENST00000511084 513 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 SNORA70.24-201ENST00000517233 118 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AP000889.2-201ENST00000532684 490 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL137849.1-201ENST00000604767 169 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL160281.1-201ENST00000605307 311 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC005344.1-201ENST00000613391 459 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 uc_338.15-201ENST00000615470 191 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 AL160413.1-201ENST00000622780 310 ntBASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHB1Q9Y5F3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 HSPE1P26-201ENST00000405341 275 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 RPS4XP7-201ENST00000406274 780 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AL158156.1-201ENST00000422509 473 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 Z82210.1-201ENST00000440037 231 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 HMGB1P30-201ENST00000492455 606 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 SUMO2P6-201ENST00000505273 288 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AP003072.1-201ENST00000531740 145 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AL157871.3-201ENST00000557231 293 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHB1Q9Y5F3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 MIR450B-201ENST00000401182 78 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RPS29P4-201ENST00000414733 161 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 MTND4P17-201ENST00000470444 350 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC009901.1-201ENST00000506703 541 ntBASIC3.79□□□□□ -1.8
PCDHB1Q9Y5F3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms