Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC009318.2-201ENST00000610917 651 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 MIR8059-201ENST00000620427 81 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 AL445487.1-201ENST00000415694 1580 ntBASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZC3H4Q9UPT8 LINC02555-201ENST00000563933 1951 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 MIR659-201ENST00000384963 97 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RPL21P75-201ENST00000396599 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RPL21P28-201ENST00000401418 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 MIR548I2-201ENST00000408348 149 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RNU2-20P-201ENST00000410425 191 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AL139156.1-201ENST00000412785 841 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 SNORD56-201ENST00000413522 71 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AL590556.1-201ENST00000423231 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AL445305.1-201ENST00000432577 575 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 snoU13.24-201ENST00000458998 104 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RPL21P11-201ENST00000461458 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RPL21P39-201ENST00000463605 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AC132942.1-201ENST00000486753 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AC093591.1-201ENST00000491435 481 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 RPL21P16-201ENST00000495531 483 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AP000787.2-201ENST00000604432 568 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 AC104623.2-202ENST00000623477 4002 ntBASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZC3H4Q9UPT8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 RNA5SP52-201ENST00000362448 134 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 Y_RNA.199-201ENST00000364014 102 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 MIR190B-201ENST00000401119 79 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 U3.32-201ENST00000408116 212 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 MIR1271-201ENST00000408537 86 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 RNU6ATAC-201ENST00000408749 126 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AL513331.1-201ENST00000411908 397 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AL158156.1-201ENST00000422509 473 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 MTATP6P4-201ENST00000427725 675 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 RPL7AP61-201ENST00000443410 636 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 RPL7P49-201ENST00000471402 708 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AC024405.2-202ENST00000532731 184 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AP002392.1-201ENST00000537692 208 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AC006077.1-201ENST00000604746 343 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 LINC00901.1-201ENST00000617252 152 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AC132825.6-201ENST00000638861 357 ntBASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZC3H4Q9UPT8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 MIR372-201ENST00000362225 67 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 SNORA63.1-201ENST00000362493 131 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 SNORD50.1-201ENST00000362987 71 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RNA5SP283-201ENST00000365604 119 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-1074P-201ENST00000383995 104 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.541-201ENST00000384640 113 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 SNORD58.1-201ENST00000391313 66 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-493P-201ENST00000391321 108 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 AC091390.3-201ENST00000426478 338 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RPL23AP22-201ENST00000437556 453 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RN7SKP210-201ENST00000459176 261 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-612P-201ENST00000516909 102 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 AC087441.2-201ENST00000529141 262 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 Y_RNA.772-201ENST00000606692 102 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 AC015914.2-201ENST00000618167 288 ntBASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.58□□□□□ -1.52
ZC3H4Q9UPT8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.57□□□□□ -1.52
ZC3H4Q9UPT8 RNU6-1159P-201ENST00000362933 107 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms