Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 HMGB1P27-201ENST00000431429 603 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 HSFY7P-201ENST00000432672 318 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 HSFY8P-201ENST00000437934 318 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 HMGN2P10-201ENST00000448085 265 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 MTATP6P7-201ENST00000453315 681 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 HSFY5P-201ENST00000453726 309 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 RPL9P6-201ENST00000492764 598 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 RPS29P21-201ENST00000496272 170 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC104685.1-201ENST00000502445 371 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 ISCA1P3-201ENST00000577104 373 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC005261.5-201ENST00000596280 355 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC008121.1-201ENST00000603244 268 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC091965.4-201ENST00000607691 587 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AL136370.1-201ENST00000608166 691 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AL355472.4-201ENST00000610233 626 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC093591.3-201ENST00000634516 308 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 MIR7157-201ENST00000635801 60 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC103706.2-201ENST00000638080 240 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDH9Q9ULB4 AC106754.1-201ENST00000562632 1513 ntBASIC2.32□□□□□ -2.04
CDH9Q9ULB4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 RNU6-658P-201ENST00000384606 106 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 NDUFS5P1-201ENST00000405668 289 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 SNORA11.4-201ENST00000408823 129 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 DUXAP8-207ENST00000456786 622 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 MRPL42P6-201ENST00000486397 371 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 GZMAP1-201ENST00000503054 631 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 RNU6-703P-201ENST00000516946 107 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC006199.1-201ENST00000548728 219 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 MTND4P33-201ENST00000556706 766 ntBASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDH9Q9ULB4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 FAM133CP-201ENST00000332869 704 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AF274854.1-201ENST00000413236 615 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 MTND1P32-201ENST00000433043 938 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 UBE2FP3-201ENST00000436366 524 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC091951.3-201ENST00000504093 246 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 SCARNA3-201ENST00000517097 143 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC010186.2-204ENST00000537668 439 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 MTND1P8-201ENST00000571424 950 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.3□□□□□ -2.04
CDH9Q9ULB4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
CDH9Q9ULB4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDH9Q9ULB4 AC092881.1-201ENST00000638218 2733 ntBASIC2.29□□□□□ -2.04
CDH9Q9ULB4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.29□□□□□ -2.04
CDH9Q9ULB4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH9Q9ULB4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.29□□□□□ -2.04
CDH9Q9ULB4 RNU6-920P-201ENST00000410926 92 ntBASIC2.29□□□□□ -2.04
CDH9Q9ULB4 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
CDH9Q9ULB4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.29□□□□□ -2.04
CDH9Q9ULB4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms