Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 AC008725.1-201ENST00000605123 2263 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 FAM35BP-202ENST00000497389 3337 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 MTCO1P12-201ENST00000414273 1543 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SNORD62.1-201ENST00000362541 86 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNU6-95P-201ENST00000384697 107 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MIR548P-201ENST00000408336 84 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SNORA3C-201ENST00000408792 125 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNU6-1304P-201ENST00000411374 106 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CYCSP33-201ENST00000414485 327 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC006517.1-201ENST00000480485 328 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MTCYBP40-201ENST00000509390 1135 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNA5SP165-201ENST00000517142 115 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MIR4429-201ENST00000580105 73 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC124303.1-201ENST00000605703 360 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC099506.2-201ENST00000623074 221 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.65□□□□□ -1.66
DDX41Q9UJV9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNORD3E-201ENST00000362899 217 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNORD42.2-201ENST00000365570 69 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RNU6-692P-201ENST00000384496 107 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 MIR559-201ENST00000385188 96 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RN7SKP202-201ENST00000410439 330 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RHEBP3-201ENST00000411920 351 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL590632.1-201ENST00000424289 371 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.631-201ENST00000459607 101 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC011005.2-201ENST00000487324 359 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC069499.1-201ENST00000489433 509 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC092436.3-201ENST00000511788 257 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC093303.1-201ENST00000514549 295 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.708-201ENST00000516950 96 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RN7SKP289-201ENST00000517244 295 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL645944.1-201ENST00000603857 493 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL080274.1-201ENST00000605565 220 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL672296.1-201ENST00000427780 2158 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MIR369-201ENST00000362155 70 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MIR23A-201ENST00000385245 73 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 HSPE1P12-201ENST00000412576 301 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RPL7P2-201ENST00000427639 268 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL158071.1-201ENST00000430315 461 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC011742.1-201ENST00000431448 434 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RPS29P7-201ENST00000439662 171 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MTND4P19-201ENST00000446659 478 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 ELOCP24-201ENST00000456370 334 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RN7SL542P-201ENST00000467147 294 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC034236.1-201ENST00000469891 373 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RN7SL132P-201ENST00000478131 296 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC025755.1-201ENST00000521306 278 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms