Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 AC008725.1-201ENST00000605123 2263 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 FAM35BP-202ENST00000497389 3337 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 MTCO1P12-201ENST00000414273 1543 ntBASIC4.67□□□□□ -1.66
DDX41Q9UJV9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
DDX41Q9UJV9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SNORD62.1-201ENST00000362541 86 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNU6-95P-201ENST00000384697 107 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MIR548P-201ENST00000408336 84 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SNORA3C-201ENST00000408792 125 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNU6-1304P-201ENST00000411374 106 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CYCSP33-201ENST00000414485 327 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 NDUFB1P2-201ENST00000449477 176 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC006517.1-201ENST00000480485 328 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MTCYBP40-201ENST00000509390 1135 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 RNA5SP165-201ENST00000517142 115 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 IGKV2D-19-201ENST00000523346 262 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 MIR4429-201ENST00000580105 73 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC124303.1-201ENST00000605703 360 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 AC099506.2-201ENST00000623074 221 ntBASIC4.66□□□□□ -1.66
DDX41Q9UJV9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
DDX41Q9UJV9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.65□□□□□ -1.66
DDX41Q9UJV9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.65□□□□□ -1.66
DDX41Q9UJV9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNORD3E-201ENST00000362899 217 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNORD42.2-201ENST00000365570 69 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RNU6-692P-201ENST00000384496 107 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 MIR559-201ENST00000385188 96 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RN7SKP202-201ENST00000410439 330 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RHEBP3-201ENST00000411920 351 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL590632.1-201ENST00000424289 371 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.631-201ENST00000459607 101 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC011005.2-201ENST00000487324 359 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC069499.1-201ENST00000489433 509 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC092436.3-201ENST00000511788 257 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC093303.1-201ENST00000514549 295 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 Y_RNA.708-201ENST00000516950 96 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 RN7SKP289-201ENST00000517244 295 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL645944.1-201ENST00000603857 493 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL080274.1-201ENST00000605565 220 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 AL672296.1-201ENST00000427780 2158 ntBASIC4.65□□□□□ -1.67
DDX41Q9UJV9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
DDX41Q9UJV9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MIR369-201ENST00000362155 70 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MIR23A-201ENST00000385245 73 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 HSPE1P12-201ENST00000412576 301 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 UBE2D3P2-201ENST00000424409 445 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RPL7P2-201ENST00000427639 268 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL158071.1-201ENST00000430315 461 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC011742.1-201ENST00000431448 434 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RPS29P7-201ENST00000439662 171 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 MTND4P19-201ENST00000446659 478 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 ELOCP24-201ENST00000456370 334 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RN7SL542P-201ENST00000467147 294 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC034236.1-201ENST00000469891 373 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 RN7SL132P-201ENST00000478131 296 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AC025755.1-201ENST00000521306 278 ntBASIC4.64□□□□□ -1.67
DDX41Q9UJV9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.64□□□□□ -1.67
DDX41Q9UJV9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms