Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 AC024581.2-201ENST00000619986 252 ntBASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 AC097372.5-201ENST00000623665 376 ntBASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 AC063976.2-201ENST00000425667 3556 ntBASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
FOXD3Q9UJU5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 ZNF826P-207ENST00000622273 1910 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 SNORD113-8-201ENST00000363497 74 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNA5SP189-201ENST00000364920 115 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNA5SP428-201ENST00000365129 132 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNU1-73P-201ENST00000383971 164 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AL139156.1-201ENST00000412785 841 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 FAR2P2-201ENST00000413041 594 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RPS29P9-201ENST00000440360 171 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC098831.1-201ENST00000440661 216 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC243964.1-201ENST00000441814 261 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC016700.2-201ENST00000446011 156 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RPL23AP14-201ENST00000468281 468 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC005921.1-201ENST00000510589 286 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNU6-1114P-201ENST00000516022 107 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RNU6-496P-201ENST00000516145 99 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 MIR4270-201ENST00000581799 70 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC004792.1-201ENST00000614523 137 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 U2.14-201ENST00000615943 113 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AC137590.2-201ENST00000619709 240 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AP001642.1-201ENST00000624727 2117 ntBASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FOXD3Q9UJU5 AL450345.1-202ENST00000605741 3881 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 Y_RNA.16-201ENST00000362421 102 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU6-222P-201ENST00000362438 107 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU4-90P-201ENST00000362773 141 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 Y_RNA.274-201ENST00000364714 101 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 Y_RNA.277-201ENST00000364754 102 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU6-290P-201ENST00000365212 101 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU6-898P-201ENST00000365627 104 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU6-142P-201ENST00000384019 107 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNU6-843P-201ENST00000384454 104 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 MIR888-201ENST00000401186 77 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 SNORA77-201ENST00000408716 125 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNA5SP44-201ENST00000410446 133 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 EIF1P2-201ENST00000428233 350 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 VDAC1P3-201ENST00000434069 851 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RPS15AP7-201ENST00000439294 405 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC104332.1-201ENST00000440471 797 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC112498.1-201ENST00000444401 332 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 SERF1AP1-201ENST00000514575 187 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RNA5SP468-201ENST00000516782 93 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC023824.2-201ENST00000566185 400 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC120057.2-201ENST00000571520 271 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RN7SL52P-201ENST00000584271 284 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC073657.2-201ENST00000605661 303 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AL591926.8-201ENST00000616876 211 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 MIR6134-201ENST00000617606 109 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RN7SL722P-201ENST00000617780 284 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 RN7SL565P-201ENST00000618246 284 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC087385.3-201ENST00000620477 187 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC010300.1-201ENST00000600671 5134 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 USP8P1-201ENST00000494673 3183 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 AC112198.2-201ENST00000426589 6996 ntBASIC4.48□□□□□ -1.69
FOXD3Q9UJU5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms