Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 USP9YP22-201ENST00000438971 294 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 CECR9-201ENST00000453421 199 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC008481.1-201ENST00000463278 396 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC104685.1-201ENST00000502445 371 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC008837.1-201ENST00000511513 412 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 HSBP1P1-201ENST00000555205 166 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC010975.3-201ENST00000618727 978 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AC079416.3-201ENST00000624479 549 ntBASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS29Q9UBQ0 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OR5T3-201ENST00000303059 1023 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 TXNP7-201ENST00000406296 293 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OR9R1P-201ENST00000412200 877 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC007435.1-201ENST00000421086 415 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AMD1P1-201ENST00000457220 922 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC013267.1-201ENST00000458227 267 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC087884.1-201ENST00000469738 328 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 RPL7P18-201ENST00000478965 734 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC114981.1-201ENST00000503897 678 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 SNORA25.11-201ENST00000515935 105 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 RNU6-714P-201ENST00000516963 103 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL121821.2-201ENST00000556081 394 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 DUXAP1-201ENST00000556632 463 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL355598.1-201ENST00000604169 202 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AC011939.3-201ENST00000613686 466 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 AL109620.1-201ENST00000618738 1197 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 Z99571.1-201ENST00000636677 394 ntBASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
VPS29Q9UBQ0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 MIR1289-2-201ENST00000408360 111 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 VN1R36P-201ENST00000414936 291 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 BTF3L4P3-201ENST00000418879 476 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 CYCSP49-201ENST00000420810 319 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 RNA5SP165-201ENST00000517142 115 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC090079.2-201ENST00000575289 768 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC010928.2-201ENST00000588017 287 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AF129408.1-201ENST00000608767 431 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC253576.2-201ENST00000618815 580 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 MTCO1P4-201ENST00000520516 1409 ntBASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VPS29Q9UBQ0 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 SNORA25B-201ENST00000365507 128 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 SNORA40.19-201ENST00000390846 128 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RNU2-68P-201ENST00000410878 191 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 BX664727.1-201ENST00000416024 466 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC097463.2-201ENST00000421074 142 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 BX119904.4-201ENST00000424402 301 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 DPRXP1-201ENST00000426312 460 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RSU1P2-202ENST00000437884 485 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 MTCO1P53-201ENST00000441633 699 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AL161788.1-201ENST00000441805 169 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RN7SL429P-201ENST00000479090 223 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RN7SL489P-201ENST00000486185 223 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 RN7SL327P-201ENST00000488659 223 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 AC018437.1-201ENST00000492214 406 ntBASIC1.45□□□□□ -2.18
VPS29Q9UBQ0 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms