Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU1-103P-201ENST00000516502 125 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 H3F3AP1-201ENST00000559984 334 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AC136619.2-201ENST00000563361 631 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AC025165.5-201ENST00000602802 578 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AL162713.1-201ENST00000604480 262 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AP001486.3-201ENST00000615334 372 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 uc_338.11-201ENST00000619132 160 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 MTND4P14-201ENST00000435799 1354 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 MTND4P5-201ENST00000435821 1374 ntBASIC3.21□□□□□ -1.9
HCN3Q9P1Z3 AC006020.1-201ENST00000420179 1854 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 RNU6-483P-201ENST00000384088 108 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 RNU6-658P-201ENST00000384606 106 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MIR34B-201ENST00000385076 84 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 RNU2-29P-201ENST00000410423 189 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 RNU4-46P-201ENST00000410818 138 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC007560.1-201ENST00000426912 237 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MTND1P4-201ENST00000435196 415 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC005019.1-201ENST00000436455 431 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC016691.1-201ENST00000441321 413 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 CACYBPP2-201ENST00000453625 678 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC092798.1-201ENST00000458542 409 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC083798.1-201ENST00000472671 131 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 RN7SKP219-201ENST00000516825 296 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC025755.1-201ENST00000521306 278 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AK6P1-201ENST00000540219 478 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MTCO3P24-201ENST00000572729 782 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MIR4276-201ENST00000584832 70 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 HMGN2P15-201ENST00000585707 270 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 AC007179.3-201ENST00000604976 235 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 U4.5-201ENST00000617137 123 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
HCN3Q9P1Z3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU6-552P-201ENST00000362869 119 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 SNORA69-201ENST00000383895 132 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL353729.1-201ENST00000425044 720 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 SNRPFP3-201ENST00000457792 225 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC104472.2-201ENST00000469035 601 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RPL36AP51-201ENST00000487216 318 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU6-718P-201ENST00000516166 105 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 SNORA40.12-201ENST00000516329 111 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AL512310.1-201ENST00000548639 172 ntBASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
HCN3Q9P1Z3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms