Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 HMGB1P12-201ENST00000438594 598 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 PRDX3P3-201ENST00000447765 522 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC087884.1-201ENST00000469738 328 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC117503.1-201ENST00000472241 394 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 HSPE1P6-201ENST00000479457 291 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AL049874.1-201ENST00000489560 388 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 MLLT10P2-201ENST00000506434 249 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 HMGB3P15-201ENST00000507326 574 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 IGHV3-76-201ENST00000522465 295 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AL355836.1-201ENST00000555951 870 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 MTCO3P13-201ENST00000577757 781 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 RN7SL703P-201ENST00000578485 302 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 MIR5692C1-201ENST00000585309 91 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 BDH2P1-201ENST00000602288 736 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC080078.3-201ENST00000605407 463 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 MIR15A-201ENST00000607334 83 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AL138726.1-201ENST00000614873 333 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 FAM157A-202ENST00000615155 405 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 AC134503.1-201ENST00000633048 54 ntBASIC3.61□□□□□ -1.83
EHD3Q9NZN3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.61□□□□□ -1.83
EHD3Q9NZN3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC090337.1-201ENST00000579651 2074 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RNU5A-1-201ENST00000362698 116 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RNU6-335P-201ENST00000364563 113 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 MIR548P-201ENST00000408336 84 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RPLP0P7-201ENST00000416050 667 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 BX842559.1-201ENST00000419615 532 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AL591704.1-201ENST00000432574 275 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 SNORA71B-202ENST00000439232 272 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RPL23AP14-201ENST00000468281 468 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC104472.2-201ENST00000469035 601 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC010285.1-201ENST00000470580 392 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC108860.1-201ENST00000484521 383 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 TRBV12-2-201ENST00000489763 344 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RPS27P27-201ENST00000498779 255 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 HMGB1P22-201ENST00000505315 124 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RPL39P5-202ENST00000512505 151 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 SNORA14.1-201ENST00000516113 141 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AL163153.1-201ENST00000554223 283 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 MTCO3P23-201ENST00000561363 289 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 MIR4286-201ENST00000580651 93 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AC053481.4-201ENST00000583164 216 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 MIR3171-201ENST00000584270 74 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 BNIP3P22-201ENST00000593399 556 ntBASIC3.6□□□□□ -1.83
EHD3Q9NZN3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
EHD3Q9NZN3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 OR4G2P-202ENST00000641004 1759 ntBASIC3.59□□□□□ -1.83
EHD3Q9NZN3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.59□□□□□ -1.83
EHD3Q9NZN3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms