Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 RNU2-68P-201ENST00000410878 191 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 RN7SKP192-201ENST00000411291 327 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 SKA2P1-201ENST00000425592 390 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AL117351.1-201ENST00000438864 766 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC010587.2-201ENST00000511727 448 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 MTCYBP43-201ENST00000513621 740 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC022662.1-201ENST00000580252 331 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC021171.1-201ENST00000603137 706 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AL596327.1-201ENST00000603629 213 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC007349.4-201ENST00000608114 532 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AF129408.1-201ENST00000608767 431 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC004908.2-201ENST00000609090 574 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AL049777.1-201ENST00000622740 518 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 DUXAP9-208ENST00000622815 614 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 AC097655.1-201ENST00000635075 318 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 ADAM3A-203ENST00000461344 2157 ntBASIC1.95□□□□□ -2.1
TREX1Q9NSU2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
TREX1Q9NSU2 MTND5P30-201ENST00000452896 1731 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC119751.3-201ENST00000399720 670 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 RPL17P12-201ENST00000413391 526 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 USP9YP26-201ENST00000421008 661 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 OOSP1P1-201ENST00000423265 274 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 GPM6BP2-201ENST00000432046 144 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC098831.1-201ENST00000440661 216 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC016691.1-201ENST00000441321 413 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 GPM6BP1-201ENST00000446387 144 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 LTV1P1-201ENST00000510683 1237 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 SNORA31.6-201ENST00000516241 130 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 OR5AQ1P-201ENST00000527596 927 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC091544.4-201ENST00000555268 342 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC007038.2-201ENST00000608095 740 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC010678.1-201ENST00000614118 713 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AC006386.1-201ENST00000619436 415 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 AP000720.1-201ENST00000625091 483 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
TREX1Q9NSU2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 RNU6-778P-201ENST00000363269 103 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 RNU4-68P-201ENST00000364314 141 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 RNU6-512P-201ENST00000364438 103 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL079342.1-201ENST00000401460 267 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 RNU2-40P-201ENST00000410833 196 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC080013.2-201ENST00000460866 323 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC055731.1-201ENST00000474387 401 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 TRBV1-201ENST00000476502 284 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC025755.1-201ENST00000521306 278 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC118273.2-201ENST00000532092 465 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AL133241.1-201ENST00000556832 487 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 MIR3167-201ENST00000579623 85 ntBASIC1.93□□□□□ -2.1
TREX1Q9NSU2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.93□□□□□ -2.1
TREX1Q9NSU2 AC005261.5-201ENST00000596280 355 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms