Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2□□□□□ -2.09
HMG20AQ9NP66 ARL2BPP2-201ENST00000550907 489 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2□□□□□ -2.09
HMG20AQ9NP66 ZNF519P3-201ENST00000557158 1032 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 AL356280.1-201ENST00000603614 379 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 CLPTM1LP1-201ENST00000604519 484 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC105129.3-201ENST00000605455 485 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 HMGB1P24-202ENST00000615653 685 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC104010.1-201ENST00000616889 150 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC009159.1-201ENST00000618386 642 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AP003485.2-201ENST00000623636 610 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC068057.2-201ENST00000624047 895 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC068880.5-201ENST00000624331 290 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 AC008993.2-201ENST00000631744 806 ntBASIC2□□□□□ -2.09
HMG20AQ9NP66 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2□□□□□ -2.09
HMG20AQ9NP66 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU5F-6P-201ENST00000362979 116 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU6-1167P-201ENST00000363227 94 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNY3P13-201ENST00000365542 102 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU6-14P-201ENST00000384630 106 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU6-278P-201ENST00000390945 109 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNA5SP354-201ENST00000391247 136 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 NDUFS5P1-201ENST00000405668 289 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU2-49P-201ENST00000410666 184 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RPL23AP39-201ENST00000415533 405 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 USP9YP13-201ENST00000417797 480 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RPS27AP14-201ENST00000422868 454 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 SKA2P1-201ENST00000425592 390 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AL365184.2-201ENST00000431139 435 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 UBE2D3P1-201ENST00000436669 444 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AL445687.1-201ENST00000439946 251 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU7-125P-201ENST00000458760 62 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU4-29P-201ENST00000515943 174 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RNU6-1003P-201ENST00000517099 105 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RN7SKP258-201ENST00000517151 304 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 RPL7P20-201ENST00000520308 745 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AP006587.4-201ENST00000526053 529 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC021269.2-201ENST00000532318 330 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC091489.2-201ENST00000566263 604 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 MIR3146-201ENST00000580367 79 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 MTCYBP22-201ENST00000603788 447 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC098826.3-201ENST00000603823 466 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC112187.2-201ENST00000604345 283 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AL161798.1-201ENST00000604630 131 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC103810.6-201ENST00000606708 136 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 AC131159.1-201ENST00000621854 213 ntBASIC1.99□□□□□ -2.09
HMG20AQ9NP66 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMG20AQ9NP66 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 Y_RNA.245-201ENST00000364493 95 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 MIR767-201ENST00000390228 109 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RNU2-36P-201ENST00000410361 191 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 ELOCP14-201ENST00000428070 331 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 SNRPEP9-201ENST00000436794 238 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 ELOCP7-201ENST00000439968 331 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC233279.1-201ENST00000455300 423 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RPL31P41-201ENST00000477967 372 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC139453.3-201ENST00000493276 369 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RPS27AP10-201ENST00000496103 208 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AC114786.4-201ENST00000508771 728 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RNA5SP24-201ENST00000516478 95 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RNU6-759P-201ENST00000516740 103 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 RNA5SP165-201ENST00000517142 115 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 MTND4LP18-201ENST00000526864 291 ntBASIC1.98□□□□□ -2.09
HMG20AQ9NP66 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.98□□□□□ -2.09
HMG20AQ9NP66 MIR3118-1-201ENST00000581787 76 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms