Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MTCYBP5-201ENST00000423752 1135 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 UBE2D3P2-201ENST00000424409 445 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 USP9YP18-201ENST00000425912 695 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 MTCO1P39-201ENST00000426148 480 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC090774.1-201ENST00000435925 246 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC004866.2-201ENST00000438285 481 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC011816.1-201ENST00000441346 546 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 PSPHP1-201ENST00000450062 261 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 MTCO2P29-201ENST00000465212 189 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 RPS27P27-201ENST00000498779 255 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 RNU6-64P-201ENST00000517119 105 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 SNORA31.22-201ENST00000517204 135 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 RNU6-711P-201ENST00000517255 106 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC134698.4-201ENST00000523451 826 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 OR5BN1P-201ENST00000532955 829 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 ARL2BPP2-201ENST00000550907 489 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC125611.2-201ENST00000551907 647 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 AC007014.2-201ENST00000615581 479 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 ELF2P3-201ENST00000445099 1506 ntBASIC3.18□□□□□ -1.9
UPF2Q9HAU5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
UPF2Q9HAU5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 RNU6-1090P-201ENST00000364065 94 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 Y_RNA.381-201ENST00000365666 102 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 RNU1-39P-201ENST00000383897 165 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 RNU6-637P-201ENST00000384050 107 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 RNU6-882P-201ENST00000391025 103 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 SNORD115-47-201ENST00000391226 86 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 MRPL42P2-201ENST00000403169 426 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AL121871.1-201ENST00000443413 436 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC114797.1-201ENST00000514003 728 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 ZNF519P2-201ENST00000557032 169 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 MED28P6-201ENST00000558776 231 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC025449.1-201ENST00000603896 529 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AL022099.1-201ENST00000604551 712 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AL161734.1-201ENST00000609720 557 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 AC017083.3-201ENST00000609955 700 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
UPF2Q9HAU5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPF2Q9HAU5 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 Y_RNA.450-201ENST00000384198 113 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 RNU6-74P-201ENST00000384235 107 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 RNU2-36P-201ENST00000410361 191 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 RNU6-516P-201ENST00000411381 104 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 HMGN2P35-201ENST00000412164 270 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 ISCA1P1-201ENST00000426679 387 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 MRPS10P2-201ENST00000431226 381 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC002486.1-201ENST00000435098 391 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 RNU7-59P-201ENST00000459101 61 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 FAM92A1P2-202ENST00000504766 877 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 SNORA31.21-201ENST00000517180 77 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 SUB1P2-201ENST00000556401 297 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AP005205.1-201ENST00000563503 508 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 MIR5195-201ENST00000583555 115 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.16□□□□□ -1.9
UPF2Q9HAU5 GLUD1P4-201ENST00000590914 418 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AL161756.2-201ENST00000604597 246 ntBASIC3.16□□□□□ -1.9
UPF2Q9HAU5 AC004908.2-201ENST00000609090 574 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms