Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC008549.1-201ENST00000512900 643 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC114797.1-201ENST00000514003 728 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 RNA5SP200-201ENST00000516360 103 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 RNU6-840P-201ENST00000517275 65 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC026464.5-201ENST00000562497 722 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC009977.1-201ENST00000586015 570 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 RNU6-87P-201ENST00000607561 108 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC090970.3-201ENST00000612566 866 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 MIR6132-201ENST00000622083 109 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AP003122.6-201ENST00000623831 495 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 AC025048.6-202ENST00000627667 438 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 CU459211.1-201ENST00000635667 749 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 MTND5P6-201ENST00000422338 1798 ntBASIC2.64□□□□□ -1.99
RNF41Q9H4P4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF41Q9H4P4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 OR5H15-201ENST00000383696 930 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RNU6-14P-201ENST00000384630 106 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RNU6-278P-201ENST00000390945 109 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 SNORA3.2-201ENST00000408221 125 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 Y_RNA.598-201ENST00000410480 95 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 SPA17P1-201ENST00000416656 452 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AL589872.1-201ENST00000426602 288 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RPL7L1P10-201ENST00000427790 463 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AL031667.1-201ENST00000440222 725 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RPL23AP58-201ENST00000440453 469 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 MTND2P24-201ENST00000453434 806 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RNA5SP269-201ENST00000459032 137 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RPS20P22-201ENST00000473700 357 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RAP1BP2-201ENST00000478270 544 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 OR5BM1P-201ENST00000512021 366 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 SNORA31.3-201ENST00000516029 96 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RN7SKP258-201ENST00000517151 304 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC093012.1-202ENST00000549403 582 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 ARL2BPP2-201ENST00000550907 489 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 RPL21P5-201ENST00000554662 472 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC091544.4-201ENST00000555268 342 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AC010620.1-201ENST00000601088 1102 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AP000860.1-201ENST00000605250 559 ntBASIC2.63□□□□□ -1.99
RNF41Q9H4P4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RNF41Q9H4P4 AL049641.1-201ENST00000441055 1948 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RNU6-297P-201ENST00000384636 107 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC092427.1-202ENST00000430569 476 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 MTND6P13-201ENST00000443510 523 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC010099.1-201ENST00000455434 375 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RNU6-420P-201ENST00000458780 107 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RPS29P12-201ENST00000460178 152 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AIG1P1-201ENST00000503376 148 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 RNU2-46P-201ENST00000517038 113 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AP000889.2-201ENST00000532684 490 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 TRAV28-201ENST00000557548 323 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 MIR1273D-201ENST00000577266 86 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AL359999.1-201ENST00000604513 294 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 NUTF2P8-201ENST00000604593 363 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC121334.2-201ENST00000605387 271 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC068276.1-201ENST00000605793 379 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AL451064.1-201ENST00000607718 471 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC103710.1-201ENST00000610003 901 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 AC025594.3-201ENST00000613068 790 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 ZNF658B-202ENST00000615961 3375 ntBASIC2.62□□□□□ -1.99
RNF41Q9H4P4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF41Q9H4P4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms