Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 MTCO2P16-201ENST00000436962 677 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 MTCO1P19-201ENST00000443487 500 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 RPL31P3-201ENST00000458430 332 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC096725.1-201ENST00000514266 313 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 MTCO3P13-201ENST00000577757 781 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AC064872.1-201ENST00000604823 1072 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AL161629.2-201ENST00000615347 275 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 U2.21-201ENST00000637295 81 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 MTND5P42-201ENST00000637720 498 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 MTND5P29-201ENST00000458676 1807 ntBASIC2.86□□□□□ -1.95
SNX25Q9H3E2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX25Q9H3E2 AL390237.1-201ENST00000404226 1415 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 Y_RNA.22-201ENST00000362492 102 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 RNU6-884P-201ENST00000363889 107 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 RNU6-946P-201ENST00000383878 107 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 Y_RNA.553-201ENST00000384670 102 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 RNU6-817P-201ENST00000391083 104 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC127391.1-201ENST00000411737 98 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 NUP35P1-201ENST00000422734 947 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 ISCA1P6-201ENST00000427740 390 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 HMGB1P27-201ENST00000431429 603 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AL353706.1-201ENST00000436728 494 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC244505.5-201ENST00000443639 207 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AL360221.1-201ENST00000445989 335 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 RNU7-23P-201ENST00000459465 62 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC007182.2-201ENST00000489251 402 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 ARL2BPP4-201ENST00000506854 471 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC022447.1-201ENST00000515358 464 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 RNU7-51P-201ENST00000516560 62 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AP002453.2-201ENST00000533503 320 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 MIR3682-201ENST00000581338 84 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC104763.2-201ENST00000604179 382 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AL133173.2-201ENST00000614270 90 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC009509.4-201ENST00000619202 509 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 AC110994.2-201ENST00000635481 492 ntBASIC2.85□□□□□ -1.95
SNX25Q9H3E2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.85□□□□□ -1.95
SNX25Q9H3E2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RNU6-288P-201ENST00000363690 104 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 SNORA20.2-201ENST00000383922 131 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RNU1-109P-201ENST00000383960 147 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MIR558-201ENST00000384920 94 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MIR888-201ENST00000401186 77 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AL356057.3-201ENST00000402607 340 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AL590004.2-201ENST00000404787 371 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RPS12P24-201ENST00000412619 387 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MTND3P17-201ENST00000416968 344 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 SKA2P1-201ENST00000425592 390 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MTND4LP3-201ENST00000468320 276 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RPS29P20-201ENST00000489592 171 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RPL39P36-201ENST00000490784 156 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC010424.1-201ENST00000506336 297 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 Vault.3-201ENST00000516676 95 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 SNORA18.6-201ENST00000516792 115 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 RNA5SP165-201ENST00000517142 115 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC090572.1-201ENST00000519251 160 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 OR5B19P-201ENST00000531766 928 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC137800.2-201ENST00000574375 120 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 MIR4635-201ENST00000583759 79 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 HMGN2P15-201ENST00000585707 270 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC040904.1-201ENST00000590850 223 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AL136363.1-201ENST00000605349 337 ntBASIC2.84□□□□□ -1.95
SNX25Q9H3E2 AC092608.2-201ENST00000624427 218 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 204 ms