Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RN7SKP13-201ENST00000515933 244 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 SNORD27.1-201ENST00000516319 72 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU1-95P-201ENST00000516357 160 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNU1-128P-201ENST00000516704 160 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RN7SKP258-201ENST00000517151 304 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AC104027.1-201ENST00000521887 300 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS16Q9H269 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS16Q9H269 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS16Q9H269 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS16Q9H269 NCAPGP2-201ENST00000557911 754 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS16Q9H269 AL360085.1-201ENST00000604713 532 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS16Q9H269 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 AC004972.1-201ENST00000623934 2209 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 ZNF826P-207ENST00000622273 1910 ntBASIC3.7□□□□□ -1.82
VPS16Q9H269 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS16Q9H269 OR4G2P-202ENST00000641004 1759 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS16Q9H269 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AL445189.1-201ENST00000405722 338 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 Y_RNA.615-201ENST00000410769 117 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 RAB9AP3-201ENST00000412737 573 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS16Q9H269 NDUFB4P5-201ENST00000415445 361 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 AL451054.2-201ENST00000420896 202 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 RAB9AP1-201ENST00000449393 573 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 Y_RNA.632-201ENST00000459189 102 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 AC126389.1-201ENST00000477436 290 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS16Q9H269 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS16Q9H269 RNU4-49P-201ENST00000516080 140 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 Y_RNA.691-201ENST00000516611 103 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 SNORA64.4-201ENST00000516632 81 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 RNU1-45P-201ENST00000517191 141 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AC020661.2-201ENST00000560114 134 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS16Q9H269 AC007998.5-201ENST00000622938 237 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 MIR7153-201ENST00000637758 57 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
VPS16Q9H269 ASNSP3-201ENST00000451989 1306 ntBASIC3.69□□□□□ -1.82
VPS16Q9H269 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS16Q9H269 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS16Q9H269 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS16Q9H269 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 AL359837.1-201ENST00000381357 287 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RNU6-641P-201ENST00000384006 107 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RNU6-701P-201ENST00000384059 107 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 MIR514A2-201ENST00000385131 88 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 MIR514A3-201ENST00000385132 88 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RNU6-510P-201ENST00000391239 108 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RNU6ATAC-201ENST00000408749 126 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS16Q9H269 AL353729.1-201ENST00000425044 720 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 CYCSP4-201ENST00000429682 331 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AC007389.2-201ENST00000434630 306 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 HMGB1P18-201ENST00000438801 619 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 DDX3P2-201ENST00000446138 111 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 MTND3P16-201ENST00000452205 344 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 NIPA2P5-201ENST00000452282 464 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RNU6-329P-201ENST00000459618 107 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 GMFBP1-201ENST00000467831 427 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AC006512.1-201ENST00000468816 291 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 RPL31P60-201ENST00000478450 367 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS16Q9H269 AC103843.2-201ENST00000530523 682 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS16Q9H269 OR5BN1P-201ENST00000532955 829 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS16Q9H269 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS16Q9H269 PSMA3P-201ENST00000555485 635 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AL121821.2-201ENST00000556081 394 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AC113139.1-201ENST00000605049 239 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 AL121992.2-201ENST00000606262 256 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 AL133216.2-202ENST00000634512 349 ntBASIC3.68□□□□□ -1.82
VPS16Q9H269 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS16Q9H269 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS16Q9H269 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS16Q9H269 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VPS16Q9H269 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
VPS16Q9H269 RNA5SP295-201ENST00000362655 121 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms