Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 Y_RNA.419-201ENST00000384041 102 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 CYCSP33-201ENST00000414485 327 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 SAR1AP4-201ENST00000429225 591 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AL158071.1-201ENST00000430315 461 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 RPL7P28-201ENST00000437739 740 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 RPS29P7-201ENST00000439662 171 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 RPL21P13-201ENST00000488305 481 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AC026801.1-201ENST00000497178 464 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 MTND5P5-201ENST00000503764 376 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.701-201ENST00000516812 110 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 SNORA31.19-201ENST00000517079 126 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AL670379.10-201ENST00000604330 253 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AL670379.9-201ENST00000605428 253 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AC010378.1-201ENST00000619270 362 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AL773545.4-201ENST00000637262 310 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 U6.99-201ENST00000637524 83 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 AL513478.4-201ENST00000641636 310 ntBASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC113Q9H0I3 MAPK10-253ENST00000641010 4072 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL360182.1-201ENST00000397433 468 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL391417.1-201ENST00000404100 426 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 Y_RNA.623-201ENST00000411128 95 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 FABP5P14-201ENST00000437273 393 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 ANP32BP2-201ENST00000454525 545 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL583843.1-201ENST00000456070 346 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 RNA5SP310-201ENST00000459084 116 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AC130509.1-201ENST00000464158 433 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AC084198.1-201ENST00000477747 402 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 RNU1-86P-201ENST00000516108 154 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 RNU1-107P-201ENST00000516617 154 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 RNU6-572P-201ENST00000516724 80 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL133215.3-201ENST00000609801 448 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC113Q9H0I3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC113Q9H0I3 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.34□□□□□ -1.72
CCDC113Q9H0I3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC113Q9H0I3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 FTLP6-201ENST00000355274 422 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AL356057.2-201ENST00000403318 432 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AL591034.1-201ENST00000407447 340 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 SNORA3C-201ENST00000408792 125 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RNU2-3P-201ENST00000410144 191 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RN7SKP158-201ENST00000410453 326 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RPL17P36-201ENST00000420302 549 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AL627311.1-201ENST00000431514 115 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 MTND1P17-201ENST00000448961 204 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 SNORD19B-201ENST00000459623 84 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AC096745.1-201ENST00000509945 370 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AC009902.1-201ENST00000519351 183 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 SYF2P1-201ENST00000550658 413 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AL645944.1-201ENST00000603857 493 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 MIR6128-201ENST00000615528 109 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AC084781.2-201ENST00000615568 161 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 RMST_4.1-201ENST00000616886 107 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 AL359757.2-201ENST00000624309 274 ntBASIC4.33□□□□□ -1.72
CCDC113Q9H0I3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AC118273.1-201ENST00000525324 3006 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 SNORD3E-201ENST00000362899 217 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 Y_RNA.135-201ENST00000363439 95 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 RNU1-64P-201ENST00000365443 163 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 SNORA75B-201ENST00000384053 137 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 MIR34A-201ENST00000385130 110 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 MIR1251-201ENST00000408552 70 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 PGBD4P6-201ENST00000421501 610 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 NDUFB1P2-201ENST00000449477 176 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AL135752.1-201ENST00000479477 471 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 AC011005.2-201ENST00000487324 359 ntBASIC4.32□□□□□ -1.72
CCDC113Q9H0I3 RNU1-54P-201ENST00000517181 120 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms