Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 NDUFA5P4-201ENST00000436704 385 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 SNRPEP9-201ENST00000436794 238 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 MTND4LP16-201ENST00000440828 295 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AL360271.2-201ENST00000447710 161 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 TRBVA-201ENST00000498804 316 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC009901.1-201ENST00000506703 541 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC008716.1-201ENST00000511084 513 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 MIR4742-201ENST00000581069 85 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 BNIP3P22-201ENST00000593399 556 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AC004805.2-201ENST00000605382 482 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 CTHRC1P1-201ENST00000605383 469 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AL022345.1-201ENST00000607292 135 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 DUSP12P1-201ENST00000612874 516 ntBASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM54Q9BYV2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 Y_RNA.167-201ENST00000363735 109 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 SNORD81.2-201ENST00000365153 76 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 RNU6-831P-201ENST00000384548 107 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 RN7SKP263-201ENST00000411194 309 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC007390.1-201ENST00000415722 356 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 PDCL2P1-201ENST00000419302 352 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 NCOR1P3-201ENST00000420479 303 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC073063.1-201ENST00000434352 607 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 PPP1R2P5-201ENST00000457256 603 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 RNU6-329P-201ENST00000459618 107 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AL135752.1-201ENST00000479477 471 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MTND3P22-201ENST00000510932 243 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 TBCAP3-201ENST00000512475 312 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MIR5685-201ENST00000579080 79 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MIR1254-2-201ENST00000579553 63 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MIR5187-201ENST00000583479 76 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 KLKP1-201ENST00000595979 403 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC243960.4-201ENST00000600532 288 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC099506.2-201ENST00000623074 221 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 AC005858.4-201ENST00000623191 700 ntBASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM54Q9BYV2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 RNU6-283P-201ENST00000364788 107 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 RPS4XP3-201ENST00000398541 413 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 SNORA57.3-201ENST00000411095 141 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AL353678.1-201ENST00000422735 741 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC006989.1-201ENST00000427212 131 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 MTND3P23-201ENST00000431980 347 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 SNORA14.1-201ENST00000516113 141 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC090136.1-201ENST00000520009 240 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 CYCSP27-201ENST00000527643 293 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC073539.2-201ENST00000597113 165 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AP000553.6-201ENST00000641242 118 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AL732372.2-225ENST00000642124 456 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 AC118273.1-201ENST00000525324 3006 ntBASIC3.62□□□□□ -1.83
TRIM54Q9BYV2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 PWAR6-201ENST00000552334 4618 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 MIR412-201ENST00000362142 91 ntBASIC3.61□□□□□ -1.83
TRIM54Q9BYV2 Y_RNA.356-201ENST00000365475 113 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms