Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 MIR369-201ENST00000362155 70 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.445-201ENST00000384168 102 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.473-201ENST00000384333 102 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RNA5SP252-201ENST00000391131 119 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 SETP5-201ENST00000437270 562 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AL714022.1-201ENST00000439897 151 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RPL23AP93-201ENST00000440847 484 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RN7SL303P-201ENST00000469773 251 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RNU6-612P-201ENST00000516909 102 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RPL21P7-201ENST00000557463 483 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC023575.1-201ENST00000580510 358 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC005086.4-201ENST00000623065 213 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC092608.2-201ENST00000624427 218 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 MAPK10-303ENST00000641324 3959 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.94□□□□□ -1.62
TRAIPQ9BWF2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 MIR921-201ENST00000401133 56 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 TMSB10P2-201ENST00000416049 131 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AC245291.1-201ENST00000419501 328 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 FTH1P25-201ENST00000447665 469 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 RPL21P126-201ENST00000470049 478 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 DEFB109F-201ENST00000491870 277 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AC006199.1-201ENST00000548728 219 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 VN1R107P-201ENST00000601784 209 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 MIR8076-201ENST00000611401 83 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AC024581.2-201ENST00000619986 252 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 AC092435.4-201ENST00000623012 4159 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 MFSD8-242ENST00000641690 4199 ntBASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRAIPQ9BWF2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AC068254.2-201ENST00000623938 3577 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.197-201ENST00000364004 102 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RNU6-336P-201ENST00000364891 107 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RNU6-596P-201ENST00000365395 98 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 SNORA75.6-201ENST00000391318 127 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 BTF3L4P2-201ENST00000392798 346 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RPL31P12-201ENST00000422587 358 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AL161651.1-201ENST00000440882 223 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RN7SL98P-201ENST00000462271 300 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AC109327.1-201ENST00000471666 403 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 MRPL42P6-201ENST00000486397 371 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RNU5F-8P-201ENST00000515941 111 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 RN7SKP21-201ENST00000516503 220 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 SNORA31.21-201ENST00000517180 77 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CPDP1-201ENST00000579660 283 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 MIR3138-201ENST00000585238 82 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 PLCE1P1-201ENST00000622094 305 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 MIR3529-201ENST00000637713 78 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 AC099654.10-201ENST00000640395 161 ntBASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.92□□□□□ -1.62
TRAIPQ9BWF2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 OR5P1P-201ENST00000299512 925 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RNU1-105P-201ENST00000363470 161 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RNU6-1059P-201ENST00000363752 98 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RNA5SP28-201ENST00000363841 119 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RNU6-105P-201ENST00000363909 104 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.394-201ENST00000383942 103 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 Y_RNA.404-201ENST00000383978 102 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RNU6-890P-201ENST00000384121 107 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 MIR591-201ENST00000385290 95 ntBASIC4.91□□□□□ -1.62
TRAIPQ9BWF2 RPS29P13-201ENST00000402041 169 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms