Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 AC007336.1-201ENST00000576365 3828 ntBASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC28BQ9BUN5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 RNU1-39P-201ENST00000383897 165 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 USP9YP27-201ENST00000418455 438 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 ZNF885P-201ENST00000420174 1098 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC104651.1-201ENST00000427559 735 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AL358934.1-201ENST00000432346 324 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC112220.1-201ENST00000434628 355 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 NANOGNBP1-201ENST00000448444 480 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 SNRPGP6-201ENST00000451124 220 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC022364.2-201ENST00000457963 554 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AL049874.1-201ENST00000489560 388 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC023194.1-201ENST00000493084 308 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC107222.1-201ENST00000510899 637 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-927P-201ENST00000516199 100 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 OR5BN1P-201ENST00000532955 829 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC124947.2-202ENST00000552735 133 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 H3F3AP1-201ENST00000559984 334 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC005951.2-201ENST00000576282 495 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC024153.1-201ENST00000603103 365 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AC106900.2-201ENST00000604994 317 ntBASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CCDC28BQ9BUN5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 OR4G2P-202ENST00000641004 1759 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.3-201ENST00000362331 103 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 Y_RNA.41-201ENST00000362646 102 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-1180P-201ENST00000364935 107 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 SNORA62.3-201ENST00000365110 153 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 RNU1-100P-201ENST00000365255 165 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 NDUFS5P1-201ENST00000405668 289 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 TIMM9P3-201ENST00000428659 274 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC073464.1-201ENST00000429823 534 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 RPS20P22-201ENST00000473700 357 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC126182.1-201ENST00000478134 357 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 RPL32P34-201ENST00000486380 400 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC007182.2-201ENST00000489251 402 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 SNORA31.3-201ENST00000516029 96 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 SNORA74D-201ENST00000516404 141 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 ATP5F1P5-201ENST00000526403 760 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AP003033.1-201ENST00000527244 415 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC012493.2-201ENST00000595083 291 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC010620.2-201ENST00000600135 313 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AL136363.1-201ENST00000605349 337 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC090132.2-201ENST00000615881 347 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC009161.2-201ENST00000624626 138 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 AC026241.1-201ENST00000517873 2142 ntBASIC2.62□□□□□ -1.99
CCDC28BQ9BUN5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RNU6-282P-201ENST00000365357 103 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 MIR449B-201ENST00000384995 97 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AL158156.1-201ENST00000422509 473 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 FCF1P1-201ENST00000432690 571 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RPS15AP7-201ENST00000439294 405 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 VN1R34P-201ENST00000447387 883 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AL031183.1-201ENST00000457667 207 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 AC013267.1-201ENST00000458227 267 ntBASIC2.61□□□□□ -1.99
CCDC28BQ9BUN5 RNA5SP310-201ENST00000459084 116 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms