Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
NDC1Q9BTX1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 UBE2L2-201ENST00000254302 429 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 SNORA7.2-201ENST00000364446 145 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 RNA5SP97-201ENST00000365006 84 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.594-201ENST00000410373 140 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 MCFD2P1-201ENST00000417812 300 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AL451062.2-201ENST00000427515 271 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC026801.1-201ENST00000497178 464 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 APOOP4-201ENST00000513530 597 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 RNU6-143P-201ENST00000516942 93 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC025423.5-201ENST00000550230 219 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC018462.2-201ENST00000605375 395 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AP002826.1-201ENST00000608835 315 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AC107294.1-201ENST00000609524 467 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 PLCE1P1-201ENST00000622094 305 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 AL732372.2-225ENST00000642124 456 ntBASIC3.8□□□□□ -1.8
NDC1Q9BTX1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDC1Q9BTX1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.158-201ENST00000363651 101 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RNU6-371P-201ENST00000364283 108 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RNU6-1303P-201ENST00000364841 107 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RNU6-1032P-201ENST00000384100 107 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.463-201ENST00000384271 102 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 MIR1290-201ENST00000408735 78 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AL356867.1-201ENST00000429623 299 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC236972.1-201ENST00000433225 199 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RPL21P11-201ENST00000461458 483 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 PPIAP15-201ENST00000479662 484 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC078817.1-201ENST00000492623 435 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 SNORA31.8-201ENST00000516327 108 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 RNA5SP179-201ENST00000517284 121 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC087854.1-201ENST00000519706 414 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC002044.1-201ENST00000606707 158 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC011890.2-201ENST00000613393 294 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC007485.1-201ENST00000616755 206 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 AC018555.1-201ENST00000567548 1980 ntBASIC3.79□□□□□ -1.8
NDC1Q9BTX1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDC1Q9BTX1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 MARK2P15-201ENST00000432204 2186 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RNU6-266P-201ENST00000364225 107 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RNU6-196P-201ENST00000384315 107 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 MIR23A-201ENST00000385245 73 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RNA5SP171-201ENST00000391071 115 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 MRPL42P3-201ENST00000401492 326 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RNU6-985P-201ENST00000410182 104 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 RPL21P90-201ENST00000415692 466 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 TBCAP1-201ENST00000436520 327 ntBASIC3.78□□□□□ -1.8
NDC1Q9BTX1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.78□□□□□ -1.8
NDC1Q9BTX1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms