Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR4505-201ENST00000582238 73 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 RNA5SP108-201ENST00000605921 117 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USB1Q9BQ65 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USB1Q9BQ65 MAPK10-349ENST00000641767 3661 ntBASIC5.07□□□□□ -1.6
USB1Q9BQ65 STX3-208ENST00000641815 3236 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USB1Q9BQ65 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USB1Q9BQ65 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 RNU6-324P-201ENST00000363957 106 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 RNU6-801P-201ENST00000364087 105 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 MIR626-201ENST00000385032 94 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC006461.1-201ENST00000412637 326 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 MRPL53P1-201ENST00000414323 319 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 RPS23P2-201ENST00000463671 415 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 RAC1P5-201ENST00000512182 576 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 RNU6-436P-201ENST00000516171 114 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC007225.2-201ENST00000562529 256 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 RN7SL787P-201ENST00000613000 284 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 AC013791.1-201ENST00000616619 62 ntBASIC5.06□□□□□ -1.6
USB1Q9BQ65 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
USB1Q9BQ65 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 RNU6-270P-201ENST00000364131 105 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 RN7SKP224-201ENST00000364140 325 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 RNU4-10P-201ENST00000364383 140 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 SNORA8.3-201ENST00000384679 139 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 MIR888-201ENST00000401186 77 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 AL160275.2-201ENST00000412010 394 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 RNF10P1-201ENST00000418589 369 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 AC012306.1-201ENST00000423267 114 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 AC244670.1-201ENST00000436879 112 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 KRT8P51-201ENST00000438938 274 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 RPL36AP39-201ENST00000445859 318 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 AL389915.2-201ENST00000454576 441 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 RPL21P126-201ENST00000470049 478 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 TRBV5-2-201ENST00000489095 273 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 AC127455.1-201ENST00000565496 145 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 MIR3936-201ENST00000584304 110 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 FO393422.1-201ENST00000603908 708 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 CU639417.4-201ENST00000623928 207 ntBASIC5.05□□□□□ -1.6
USB1Q9BQ65 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
USB1Q9BQ65 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USB1Q9BQ65 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USB1Q9BQ65 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 U3.10-201ENST00000364459 214 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 RNU6-335P-201ENST00000364563 113 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 Y_RNA.293-201ENST00000364908 93 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 RNU1-100P-201ENST00000365255 165 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 U3.40-201ENST00000408706 208 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC096649.2-201ENST00000416186 393 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC092047.1-201ENST00000424997 240 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC125238.1-201ENST00000448842 249 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 snoU13.24-201ENST00000458998 104 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 UQCRHP4-201ENST00000471686 272 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 RN7SL466P-201ENST00000497546 295 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 HMGB1P22-201ENST00000505315 124 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC006499.6-201ENST00000511169 607 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 RN7SKP179-201ENST00000516126 217 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 SNORA43.3-201ENST00000517240 103 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC136628.3-201ENST00000521868 290 ntBASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.04□□□□□ -1.6
USB1Q9BQ65 LARP7P3-201ENST00000579888 337 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms