Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 Y_RNA.623-201ENST00000411128 95 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 RN7SKP53-201ENST00000411337 315 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.64□□□□□ -1.83
VRK1Q99986 SKA2P1-201ENST00000425592 390 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AC098614.2-201ENST00000426040 255 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AL157831.1-201ENST00000426134 473 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.64□□□□□ -1.83
VRK1Q99986 RPL23AP46-201ENST00000438548 490 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 SNORD19B-201ENST00000459623 84 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VRK1Q99986 RNU6-703P-201ENST00000516946 107 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 SNORA31.19-201ENST00000517079 126 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.64□□□□□ -1.83
VRK1Q99986 SYF2P1-201ENST00000550658 413 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.64□□□□□ -1.83
VRK1Q99986 AL353621.2-201ENST00000605340 133 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.64□□□□□ -1.83
VRK1Q99986 AL355365.1-201ENST00000616480 294 ntBASIC3.64□□□□□ -1.83
VRK1Q99986 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.64□□□□□ -1.83
VRK1Q99986 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VRK1Q99986 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VRK1Q99986 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VRK1Q99986 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.64□□□□□ -1.83
VRK1Q99986 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VRK1Q99986 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VRK1Q99986 Y_RNA.126-201ENST00000363382 111 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 SNORD14B-201ENST00000364533 90 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 RNU6-1297P-201ENST00000384415 104 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.63□□□□□ -1.83
VRK1Q99986 RPL7P37-201ENST00000425095 738 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 UBE2V1P4-201ENST00000425374 344 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 HMGB1P9-201ENST00000429856 646 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.63□□□□□ -1.83
VRK1Q99986 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.63□□□□□ -1.83
VRK1Q99986 RPL23AP81-201ENST00000455252 467 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 RPS29P19-201ENST00000479709 171 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 HMGB3P15-201ENST00000507326 574 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 RNU6-559P-201ENST00000516151 98 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 Y_RNA.701-201ENST00000516812 110 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.63□□□□□ -1.83
VRK1Q99986 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
VRK1Q99986 AC026371.1-201ENST00000551867 419 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 AMZ2P1-203ENST00000565833 850 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 FRG2DP-202ENST00000566967 323 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.63□□□□□ -1.83
VRK1Q99986 RNU6-85P-201ENST00000605989 107 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 AL133255.1-201ENST00000606374 441 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 ATP5A1P2-202ENST00000616464 443 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 U2.21-201ENST00000637295 81 ntBASIC3.63□□□□□ -1.83
VRK1Q99986 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VRK1Q99986 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.63□□□□□ -1.83
VRK1Q99986 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VRK1Q99986 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK1Q99986 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK1Q99986 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK1Q99986 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VRK1Q99986 AC138393.1-203ENST00000327086 343 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNA5SP515-201ENST00000364570 118 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNU6-593P-201ENST00000364716 112 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 XGY1-201ENST00000381172 446 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNU6-166P-201ENST00000384371 107 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 Y_RNA.482-201ENST00000384377 111 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 SNORA1.3-201ENST00000384676 136 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VRK1Q99986 SNORA3C-201ENST00000408792 125 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNA5SP317-201ENST00000410176 116 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNU4-14P-201ENST00000410858 122 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNA5SP311-201ENST00000411290 116 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.62□□□□□ -1.83
VRK1Q99986 AL096701.2-201ENST00000416920 238 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AL645568.3-201ENST00000433683 316 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 OR4C10P-201ENST00000434991 931 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.62□□□□□ -1.83
VRK1Q99986 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
VRK1Q99986 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 MTATP6P7-201ENST00000453315 681 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AL583843.1-201ENST00000456070 346 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 AC104472.2-201ENST00000469035 601 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC084198.1-201ENST00000477747 402 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AF213884.1-201ENST00000488102 463 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC069499.1-201ENST00000489433 509 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RN7SL691P-201ENST00000494487 301 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 RNA5SP315-201ENST00000516340 116 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNU6-572P-201ENST00000516724 80 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 RNA5SP312-201ENST00000517068 116 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 AP005597.4-201ENST00000526762 229 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.62□□□□□ -1.83
VRK1Q99986 AC025423.5-201ENST00000550230 219 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AL161729.3-201ENST00000603533 673 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 AL355598.1-201ENST00000604169 202 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 NUTF2P8-201ENST00000604593 363 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 FAM27D1-201ENST00000612308 341 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 MIR492-201ENST00000638676 116 ntBASIC3.62□□□□□ -1.83
VRK1Q99986 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
VRK1Q99986 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms