Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC092809.3-201ENST00000415453 231 ntBASIC2.58□□□□□ -2
SSX3Q99909 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.58□□□□□ -2
SSX3Q99909 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.58□□□□□ -2
SSX3Q99909 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AL353729.1-201ENST00000425044 720 ntBASIC2.58□□□□□ -2
SSX3Q99909 MED13P1-201ENST00000428342 171 ntBASIC2.58□□□□□ -2
SSX3Q99909 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.58□□□□□ -2
SSX3Q99909 AL671855.1-201ENST00000446875 1203 ntBASIC2.58□□□□□ -2
SSX3Q99909 RNU7-26P-201ENST00000458980 63 ntBASIC2.58□□□□□ -2
SSX3Q99909 AL121769.1-201ENST00000469473 401 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC128713.1-201ENST00000471495 306 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC139453.3-201ENST00000493276 369 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.58□□□□□ -2
SSX3Q99909 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 Y_RNA.689-201ENST00000516589 107 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
SSX3Q99909 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.58□□□□□ -2
SSX3Q99909 AC024619.4-201ENST00000580924 316 ntBASIC2.58□□□□□ -2
SSX3Q99909 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC110760.3-201ENST00000598794 467 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC090578.1-201ENST00000604955 591 ntBASIC2.58□□□□□ -2
SSX3Q99909 AL162274.2-201ENST00000614406 332 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC138932.5-201ENST00000617759 563 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC018692.3-201ENST00000623929 123 ntBASIC2.58□□□□□ -2
SSX3Q99909 AC026422.1-201ENST00000623961 452 ntBASIC2.58□□□□□ -2
SSX3Q99909 MIR3199-2-201ENST00000636243 86 ntBASIC2.58□□□□□ -2
SSX3Q99909 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.58□□□□□ -2
SSX3Q99909 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.58□□□□□ -2
SSX3Q99909 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSX3Q99909 MTND4P35-201ENST00000604257 1375 ntBASIC2.58□□□□□ -2
SSX3Q99909 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSX3Q99909 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
SSX3Q99909 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSX3Q99909 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 RNU6-658P-201ENST00000384606 106 ntBASIC2.57□□□□□ -2
SSX3Q99909 MIR301A-201ENST00000385261 86 ntBASIC2.57□□□□□ -2
SSX3Q99909 SNORA48.2-201ENST00000390926 124 ntBASIC2.57□□□□□ -2
SSX3Q99909 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 AP000936.2-201ENST00000447151 681 ntBASIC2.57□□□□□ -2
SSX3Q99909 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 RPS29P2-201ENST00000479278 136 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 AC117522.1-201ENST00000509821 380 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 RNU6-914P-201ENST00000516749 109 ntBASIC2.57□□□□□ -2
SSX3Q99909 RNU6-1220P-201ENST00000517126 108 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 OR5B19P-201ENST00000531766 928 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC087883.1-201ENST00000551882 391 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
SSX3Q99909 MIR2682-201ENST00000580305 110 ntBASIC2.57□□□□□ -2
SSX3Q99909 MIR5194-201ENST00000582634 120 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC040904.1-201ENST00000590850 223 ntBASIC2.57□□□□□ -2
SSX3Q99909 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.57□□□□□ -2
SSX3Q99909 AC073544.2-201ENST00000601155 540 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC005000.2-201ENST00000605468 310 ntBASIC2.57□□□□□ -2
SSX3Q99909 AC135507.1-201ENST00000607214 561 ntBASIC2.57□□□□□ -2
SSX3Q99909 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
SSX3Q99909 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSX3Q99909 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.57□□□□□ -2
SSX3Q99909 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.57□□□□□ -2
SSX3Q99909 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.57□□□□□ -2
SSX3Q99909 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSX3Q99909 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
SSX3Q99909 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSX3Q99909 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
SSX3Q99909 RNU6-169P-201ENST00000365336 107 ntBASIC2.56□□□□□ -2
SSX3Q99909 MIR128-1-201ENST00000384921 82 ntBASIC2.56□□□□□ -2
SSX3Q99909 SNORA48.5-201ENST00000391143 135 ntBASIC2.56□□□□□ -2
SSX3Q99909 U3.26-201ENST00000391236 204 ntBASIC2.56□□□□□ -2
SSX3Q99909 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.56□□□□□ -2
SSX3Q99909 RNU6-248P-201ENST00000410720 107 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.56□□□□□ -2
SSX3Q99909 AC080125.1-201ENST00000414888 684 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC096649.2-201ENST00000416186 393 ntBASIC2.56□□□□□ -2
SSX3Q99909 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.56□□□□□ -2
SSX3Q99909 AL109913.1-201ENST00000421173 514 ntBASIC2.56□□□□□ -2
SSX3Q99909 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.56□□□□□ -2
SSX3Q99909 AC098831.1-201ENST00000440661 216 ntBASIC2.56□□□□□ -2
SSX3Q99909 OSTCP8-201ENST00000445117 448 ntBASIC2.56□□□□□ -2
SSX3Q99909 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms