Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AP001486.3-201ENST00000615334 372 ntBASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP1Q96SZ6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDK5RAP1Q96SZ6 AC010615.1-201ENST00000594254 1764 ntBASIC4.09□□□□□ -1.76
CDK5RAP1Q96SZ6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.09□□□□□ -1.76
CDK5RAP1Q96SZ6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.09□□□□□ -1.76
CDK5RAP1Q96SZ6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6-774P-201ENST00000363238 107 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6-770P-201ENST00000363929 105 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6-593P-201ENST00000364716 112 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 Y_RNA.288-201ENST00000364854 92 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORA23-201ENST00000365128 182 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORA16.2-201ENST00000390991 127 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RPL21P1-201ENST00000399532 476 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC069218.2-201ENST00000411665 344 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 ZNF734P-201ENST00000419494 1534 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC008065.1-201ENST00000428525 348 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 SNAP23P1-201ENST00000433229 246 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RN7SL323P-201ENST00000494712 295 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 VN1R104P-201ENST00000505115 1009 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC105758.1-201ENST00000506038 399 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC108078.2-201ENST00000510750 236 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 MIR2114-201ENST00000516645 80 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RNA5SP309-201ENST00000516670 106 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 RN7SKP40-201ENST00000517211 242 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC090115.3-201ENST00000553218 849 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 SETP2-201ENST00000553886 926 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 MIR4293-201ENST00000584305 78 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC005344.1-201ENST00000613391 459 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC015967.1-201ENST00000619893 476 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AC103858.2-201ENST00000621471 543 ntBASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.08□□□□□ -1.76
CDK5RAP1Q96SZ6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 FAM35DP-201ENST00000323387 2712 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 Y_RNA.2-201ENST00000362330 96 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RNY3P11-201ENST00000364153 102 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 Y_RNA.350-201ENST00000365409 98 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6-95P-201ENST00000384697 107 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6-278P-201ENST00000390945 109 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 MIR548M-201ENST00000408260 86 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU2-23P-201ENST00000410545 195 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RNA5SP107-201ENST00000411358 122 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RPL21P109-201ENST00000422213 475 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RANP8-201ENST00000444720 713 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 OSTCP8-201ENST00000445117 448 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AL353691.1-201ENST00000451332 387 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORD127-201ENST00000458892 86 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RPL21P8-201ENST00000465083 535 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 Y_RNA.673-201ENST00000516306 88 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 HSBP1P1-201ENST00000555205 166 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AC008521.1-201ENST00000587471 187 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AC011494.1-201ENST00000596454 237 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 RPL23AP92-201ENST00000603609 255 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 AL355810.1-201ENST00000614629 552 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDK5RAP1Q96SZ6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 MIR554-201ENST00000384874 96 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORD70.1-201ENST00000391007 85 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 SNORA57.3-201ENST00000411095 141 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AL158071.1-201ENST00000430315 461 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AC007389.2-201ENST00000434630 306 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AC112492.4-201ENST00000456549 352 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 RNU1-54P-201ENST00000517181 120 ntBASIC4.06□□□□□ -1.76
CDK5RAP1Q96SZ6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms