Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RPL30P14-201ENST00000482744 348 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 RNU6-1072P-201ENST00000384703 107 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 RNU6-443P-201ENST00000384780 107 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.38□□□□□ -2.35
CFAP54Q96N23 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.38□□□□□ -2.35
CFAP54Q96N23 AC245047.4-201ENST00000433189 144 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 HMGN2P16-201ENST00000456802 261 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 HSPE1P22-201ENST00000456856 327 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 CABYRP1-201ENST00000465493 1045 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 AC093770.1-201ENST00000511559 571 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 AC078899.2-201ENST00000595282 212 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 Pinc.1-201ENST00000616452 154 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
CFAP54Q96N23 AC021146.2-201ENST00000504736 556 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 AP001180.6-201ENST00000584918 159 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 AC106800.4-201ENST00000614905 153 ntBASIC0.38□□□□□ -2.35
CFAP54Q96N23 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.38□□□□□ -2.35
CFAP54Q96N23 MIR604-201ENST00000384880 94 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 MIR1207-201ENST00000408249 87 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 RPS29P8-201ENST00000445109 171 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 AC055731.1-201ENST00000474387 401 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 FAM206BP-201ENST00000510179 541 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 CYCSP2-201ENST00000558168 301 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CFAP54Q96N23 RNU6-939P-201ENST00000384634 107 ntBASIC0.37□□□□□ -2.35
CFAP54Q96N23 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.37□□□□□ -2.35
CFAP54Q96N23 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
CFAP54Q96N23 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CFAP54Q96N23 RNU6-733P-201ENST00000410759 104 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 RN7SKP142-201ENST00000411236 328 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 UBE2V2P3-201ENST00000433562 437 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 RPL23AP6-201ENST00000446637 472 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 snoU13.11-201ENST00000459219 104 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC068714.1-201ENST00000559623 800 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 NUTF2P8-201ENST00000604593 363 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AP002784.2-201ENST00000397300 549 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC119618.1-201ENST00000434191 222 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC139453.3-201ENST00000493276 369 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 CYCTP-201ENST00000504253 315 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 AL136363.1-201ENST00000605349 337 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AC104763.3-201ENST00000613765 618 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AL138726.1-201ENST00000614873 333 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AL121890.5-201ENST00000620848 304 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.36□□□□□ -2.35
CFAP54Q96N23 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 MIR934-201ENST00000401241 83 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 ARL2BPP3-201ENST00000421226 480 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 RNU6-322P-201ENST00000516010 103 ntBASIC0.36□□□□□ -2.35
CFAP54Q96N23 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.36□□□□□ -2.35
CFAP54Q96N23 RPS3AP36-201ENST00000398190 775 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC079448.1-201ENST00000449377 373 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 SNRPGP15-201ENST00000600149 222 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 AL627230.6-201ENST00000611129 280 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 RNA5SP98-201ENST00000363158 137 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 Y_RNA.476-201ENST00000384347 108 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC096649.2-201ENST00000416186 393 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 snoU109.1-201ENST00000459339 135 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC008834.1-201ENST00000511612 175 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.35□□□□□ -2.35
CFAP54Q96N23 AC090616.3-201ENST00000582184 217 ntBASIC0.35□□□□□ -2.35
CFAP54Q96N23 RNU6-50P-201ENST00000362356 103 ntBASIC0.34□□□□□ -2.35
CFAP54Q96N23 RNU2-71P-201ENST00000411395 189 ntBASIC0.34□□□□□ -2.35
CFAP54Q96N23 HMGB3P10-201ENST00000434734 572 ntBASIC0.34□□□□□ -2.35
CFAP54Q96N23 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.34□□□□□ -2.35
CFAP54Q96N23 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.34□□□□□ -2.35
CFAP54Q96N23 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.34□□□□□ -2.35
CFAP54Q96N23 RNU1-72P-201ENST00000362976 153 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 AL356131.1-201ENST00000405826 414 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 RNU6-1077P-201ENST00000410506 102 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 RPS27P22-201ENST00000478056 241 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 MIR4529-201ENST00000578110 78 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CFAP54Q96N23 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 MTND2P2-201ENST00000434633 945 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 DYNLT3P2-201ENST00000442517 295 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 AC097499.1-201ENST00000444277 208 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 AC078857.1-201ENST00000469870 667 ntBASIC0.34□□□□□ -2.36
CFAP54Q96N23 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.34□□□□□ -2.36
CFAP54Q96N23 ZNF29P-201ENST00000225587 168 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 OFD1P18Y-201ENST00000420889 959 ntBASIC0.33□□□□□ -2.36
CFAP54Q96N23 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.33□□□□□ -2.36
CFAP54Q96N23 RSU1P2-202ENST00000437884 485 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms