Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-533P-201ENST00000384144 107 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AL359511.1-201ENST00000402970 211 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AL162578.1-201ENST00000406202 378 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC011233.1-201ENST00000422812 283 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AL353729.1-201ENST00000425044 720 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 HMGB3P12-201ENST00000438745 556 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 HMGN2P10-201ENST00000448085 265 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 MTND1P12-201ENST00000455231 147 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 RPL23AP94-201ENST00000512518 302 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 SNORD19.2-201ENST00000516978 73 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 ARL2BPP2-201ENST00000550907 489 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC021739.1-201ENST00000559631 174 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC027176.1-201ENST00000560204 514 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 MIR3616-201ENST00000584070 92 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC135507.1-201ENST00000607214 561 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC025034.2-201ENST00000623264 286 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC091953.2-201ENST00000623979 160 ntBASIC2.65□□□□□ -1.99
ZNF560Q96MR9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
ZNF560Q96MR9 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 NACAP2-201ENST00000318548 624 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 RNU5F-6P-201ENST00000362979 116 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 RNY4P16-201ENST00000364768 94 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 RNU2-36P-201ENST00000410361 191 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 MTND4P25-201ENST00000441039 533 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC027673.1-201ENST00000456245 405 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC010486.1-201ENST00000511793 424 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 RNU6-143P-201ENST00000516942 93 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 SNORA31.18-201ENST00000517043 134 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC011979.2-201ENST00000527568 352 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 ZNF321P-202ENST00000550843 495 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC090616.2-202ENST00000584248 222 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL391813.1-201ENST00000603098 260 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC174048.1-201ENST00000603389 144 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 BNIP3P9-201ENST00000603714 553 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL359999.1-201ENST00000604513 294 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL365204.3-201ENST00000612448 685 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AL589743.7-201ENST00000612637 233 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC104010.1-201ENST00000616889 150 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC006338.1-201ENST00000618453 749 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 AC131159.1-201ENST00000621854 213 ntBASIC2.64□□□□□ -1.99
ZNF560Q96MR9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF560Q96MR9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RNU6-960P-201ENST00000364056 120 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RNU6-188P-201ENST00000364207 107 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 Y_RNA.608-201ENST00000410647 95 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RPS12P24-201ENST00000412619 387 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 SEPT2P1-201ENST00000419651 180 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 MTND4P20-201ENST00000424125 869 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AL445687.1-201ENST00000439946 251 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AL590365.1-201ENST00000450788 243 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 SSXP1-201ENST00000453640 473 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RPL30P6-201ENST00000475925 342 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RPL37P25-201ENST00000507308 276 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 MTND1P22-201ENST00000510572 951 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC008716.1-201ENST00000511084 513 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC118465.1-201ENST00000513820 1271 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RNA5SP24-201ENST00000516478 95 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 RNU6-1092P-201ENST00000516955 87 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC109329.2-201ENST00000519658 482 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 HMGB1P41-201ENST00000520234 440 ntBASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.63□□□□□ -1.99
ZNF560Q96MR9 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms