Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 SNORD127-201ENST00000458892 86 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 RNU7-87P-201ENST00000459343 62 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 RN7SL319P-201ENST00000480656 221 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 MIR2355-201ENST00000517199 87 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.11□□□□□ -1.59
CALR3Q96L12 AC007458.1-201ENST00000542812 373 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.11□□□□□ -1.59
CALR3Q96L12 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.11□□□□□ -1.59
CALR3Q96L12 AL442163.3-201ENST00000554110 156 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 AL442067.1-201ENST00000613261 223 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 uc_338.18-201ENST00000615451 175 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 MIR6861-201ENST00000618657 64 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CALR3Q96L12 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CALR3Q96L12 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CALR3Q96L12 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CALR3Q96L12 AC007656.2-201ENST00000624902 4547 ntBASIC5.11□□□□□ -1.59
CALR3Q96L12 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CALR3Q96L12 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.1□□□□□ -1.59
CALR3Q96L12 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
CALR3Q96L12 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CALR3Q96L12 RN7SKP162-201ENST00000363605 345 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CALR3Q96L12 Y_RNA.483-201ENST00000384380 101 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AL357515.1-201ENST00000402967 542 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.1□□□□□ -1.59
CALR3Q96L12 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.1□□□□□ -1.59
CALR3Q96L12 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.1□□□□□ -1.59
CALR3Q96L12 RPS17P8-201ENST00000434525 335 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AC125238.1-201ENST00000448842 249 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AC092324.1-201ENST00000468671 324 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 RPS4XP13-201ENST00000483219 789 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AC108022.1-201ENST00000493466 478 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 RNA5SP362-201ENST00000516048 118 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.1□□□□□ -1.59
CALR3Q96L12 ATP5J2P6-201ENST00000565203 266 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 AC010615.1-201ENST00000594254 1764 ntBASIC5.1□□□□□ -1.59
CALR3Q96L12 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.1□□□□□ -1.59
CALR3Q96L12 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.1□□□□□ -1.59
CALR3Q96L12 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CALR3Q96L12 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CALR3Q96L12 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CALR3Q96L12 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CALR3Q96L12 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CALR3Q96L12 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CALR3Q96L12 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CALR3Q96L12 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CALR3Q96L12 RNA5SP242-201ENST00000364171 118 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 Y_RNA.257-201ENST00000364596 102 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RNA5SP513-201ENST00000364648 118 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RNA5SP428-201ENST00000365129 132 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 Y_RNA.350-201ENST00000365409 98 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RNU6-968P-201ENST00000384076 107 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 SNORA70-201ENST00000384436 135 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 SNORD116-20-201ENST00000384529 92 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 SNORD96B-201ENST00000386148 79 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CALR3Q96L12 RPL21P75-201ENST00000396599 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RPL21P28-201ENST00000401418 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AL160275.2-201ENST00000412010 394 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.09□□□□□ -1.59
CALR3Q96L12 AC114755.2-201ENST00000413520 361 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AL590556.1-201ENST00000423231 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.09□□□□□ -1.59
CALR3Q96L12 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.09□□□□□ -1.59
CALR3Q96L12 Z98949.2-201ENST00000440996 144 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC243964.1-201ENST00000441814 261 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 snoU13.30-201ENST00000458951 104 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RN7SL172P-201ENST00000460535 303 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RPL21P11-201ENST00000461458 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RPL21P39-201ENST00000463605 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC010469.1-201ENST00000463864 576 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC087190.1-201ENST00000484462 480 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC107032.1-201ENST00000485945 480 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC132942.1-201ENST00000486753 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC093591.1-201ENST00000491435 481 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 RPL21P16-201ENST00000495531 483 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.09□□□□□ -1.59
CALR3Q96L12 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.09□□□□□ -1.59
CALR3Q96L12 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.09□□□□□ -1.59
CALR3Q96L12 AC024581.2-201ENST00000619986 252 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC005086.4-201ENST00000623065 213 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AC027290.2-201ENST00000623210 18662 ntBASIC5.09□□□□□ -1.59
CALR3Q96L12 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.09□□□□□ -1.59
CALR3Q96L12 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CALR3Q96L12 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CALR3Q96L12 C4BPAP1-201ENST00000415474 1893 ntBASIC5.09□□□□□ -1.6
CALR3Q96L12 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.08□□□□□ -1.6
CALR3Q96L12 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CALR3Q96L12 CUL1P1-201ENST00000509510 2425 ntBASIC5.08□□□□□ -1.6
CALR3Q96L12 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms