Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
PGBD1Q96JS3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PGBD1Q96JS3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.84□□□□□ -1.8
PGBD1Q96JS3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PGBD1Q96JS3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC017071.1-201ENST00000564407 2204 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU1-70P-201ENST00000362618 164 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 SMIM11P1-201ENST00000369586 178 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU6-701P-201ENST00000384059 107 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MIR34B-201ENST00000385076 84 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU6-712P-201ENST00000410558 100 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RN7SKP140-201ENST00000411196 284 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RPL7P46-201ENST00000425129 740 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC005326.1-201ENST00000429197 123 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC005019.1-201ENST00000436455 431 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RPL23AP67-201ENST00000465341 474 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RPL23AP11-201ENST00000475260 469 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RPL21P13-201ENST00000488305 481 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 SNORA64.4-201ENST00000516632 81 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AP001804.3-201ENST00000525146 880 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MIR3942-201ENST00000585264 109 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AF038458.1-201ENST00000588406 262 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 LLPHP1-201ENST00000603571 367 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AP001486.3-201ENST00000615334 372 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 uc_338.15-201ENST00000615470 191 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AL450472.3-201ENST00000615578 367 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 SNHG22-203ENST00000617833 660 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AC006065.5-201ENST00000623427 349 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AF117829.1-206ENST00000621883 3802 ntBASIC3.83□□□□□ -1.8
PGBD1Q96JS3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 SRP72P2-201ENST00000344851 1979 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 DDX10P1-201ENST00000448545 1933 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 RNA5SP72-201ENST00000364442 117 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 RNU6-946P-201ENST00000383878 107 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL359634.1-202ENST00000404721 284 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL590004.1-201ENST00000405321 300 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AF228730.4-201ENST00000421457 183 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 RAC1P6-201ENST00000423911 575 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 ARF4P2-201ENST00000430209 526 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 RPL23AP22-201ENST00000437556 453 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 MTCO3P45-201ENST00000443036 613 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 snoU13.3-201ENST00000459441 104 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC026801.2-201ENST00000515352 425 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC100870.1-201ENST00000522035 505 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL442663.2-201ENST00000554385 511 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 MIR3186-201ENST00000577404 85 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL022099.1-201ENST00000604551 712 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 RNA5SP108-201ENST00000605921 117 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AL365204.3-201ENST00000612448 685 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.82□□□□□ -1.8
PGBD1Q96JS3 AC092628.2-201ENST00000622492 339 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms