| MTERF3 | Q96E29 | RNU6-1029P-201 | ENST00000384109 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | Y_RNA.505-201 | ENST00000384489 | 102 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | RNU6-192P-201 | ENST00000391253 | 100 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AF274854.1-201 | ENST00000413236 | 615 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL078645.1-201 | ENST00000414377 | 423 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | OR51A5P-201 | ENST00000415429 | 942 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL031779.1-201 | ENST00000415663 | 330 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC007271.1-201 | ENST00000428188 | 382 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL589986.2-201 | ENST00000429352 | 397 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL080284.1-201 | ENST00000434493 | 442 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | SNRPEP9-201 | ENST00000436794 | 238 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | NDUFAF4P4-201 | ENST00000454883 | 502 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL109763.1-201 | ENST00000455391 | 461 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL031183.1-201 | ENST00000457667 | 207 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC022364.2-201 | ENST00000457963 | 554 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | NDUFA6-201 | ENST00000470753 | 475 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | RN7SL20P-201 | ENST00000488827 | 297 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | RPS29P20-201 | ENST00000489592 | 171 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC092436.1-201 | ENST00000506450 | 503 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | ARL4AP2-201 | ENST00000507378 | 601 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC098591.2-201 | ENST00000510152 | 315 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | LINC00824-201 | ENST00000517583 | 805 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AP001893.2-201 | ENST00000526949 | 202 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | LINC02398-201 | ENST00000536666 | 431 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | CLEC2D-214 | ENST00000543300 | 399 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | CLEC2D-216 | ENST00000545918 | 288 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC078962.4-201 | ENST00000546135 | 254 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | HMGB1P14-201 | ENST00000557424 | 591 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC020661.3-201 | ENST00000558101 | 414 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | DEFB131E-202 | ENST00000602581 | 683 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC174048.1-201 | ENST00000603389 | 144 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC245389.1-201 | ENST00000605141 | 529 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC017083.3-201 | ENST00000609955 | 700 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL138880.2-201 | ENST00000616214 | 239 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AC073308.1-201 | ENST00000623696 | 305 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | AL512643.1-201 | ENST00000635735 | 524 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | BAZ2B-202 | ENST00000343439 | 2364 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | PIK3CA-201 | ENST00000263967 | 9093 nt | APPRIS P1 TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | RAPGEF6-202 | ENST00000308008 | 4176 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | CCDC178-213 | ENST00000583930 | 3094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | WDR3-201 | ENST00000349139 | 9974 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | TRIQK-204 | ENST00000517858 | 1882 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.94 | | |
| MTERF3 | Q96E29 | RNU6-1158P-201 | ENST00000391167 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU6ATAC16P-201 | ENST00000408591 | 138 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL138737.1-202 | ENST00000418834 | 876 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC005326.1-201 | ENST00000429197 | 123 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC004888.1-201 | ENST00000450480 | 547 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | FDX1P2-201 | ENST00000450769 | 375 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU7-182P-201 | ENST00000459009 | 62 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC233702.1-201 | ENST00000482905 | 502 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RN7SL633P-201 | ENST00000488974 | 297 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC019235.1-201 | ENST00000503847 | 207 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC109927.2-201 | ENST00000506416 | 303 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC117522.3-201 | ENST00000507974 | 584 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC104806.1-201 | ENST00000508720 | 308 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC009646.1-201 | ENST00000510455 | 318 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU6-314P-201 | ENST00000516574 | 104 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU6-685P-201 | ENST00000517088 | 95 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC025575.1-201 | ENST00000548497 | 544 nt | TSL 4 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | ADI1P3-201 | ENST00000549509 | 470 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC009269.3-201 | ENST00000558429 | 472 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | H3F3AP1-201 | ENST00000559984 | 334 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | TPRKBP2-201 | ENST00000565969 | 475 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | MTATP6P3-201 | ENST00000581686 | 676 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC008739.3-201 | ENST00000603262 | 127 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC012507.3-201 | ENST00000603556 | 477 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | MTND4LP5-201 | ENST00000605152 | 292 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC126118.1-201 | ENST00000607744 | 628 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC122108.2-201 | ENST00000611946 | 526 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL359547.2-201 | ENST00000615810 | 418 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | HSPA4L-202 | ENST00000505726 | 2639 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | CKAP2P1-201 | ENST00000555477 | 2049 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | FNBP1L-203 | ENST00000370253 | 3889 nt | APPRIS ALT1 TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC022336.2-201 | ENST00000568966 | 2538 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | MUM1L1-203 | ENST00000372552 | 3957 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL355596.1-201 | ENST00000565399 | 3996 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | GTPBP8-205 | ENST00000473129 | 1518 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | NXPE1-204 | ENST00000536271 | 2289 nt | TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | Y_RNA.554-201 | ENST00000384672 | 102 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RNU6-606P-201 | ENST00000384721 | 111 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RPL17P50-201 | ENST00000396131 | 546 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | HIST1H2APS3-201 | ENST00000403259 | 134 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | PPP3R1-202 | ENST00000409377 | 684 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC010731.3-201 | ENST00000415029 | 566 nt | TSL 4 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | ELF3-AS1-201 | ENST00000415582 | 500 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC133106.1-201 | ENST00000419029 | 397 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RBM6-203 | ENST00000421682 | 684 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL445123.1-201 | ENST00000422023 | 446 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL353678.1-201 | ENST00000422735 | 741 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL160275.3-201 | ENST00000423876 | 471 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | MTCO3P30-201 | ENST00000426425 | 670 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AC005300.1-201 | ENST00000428401 | 373 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | CALM2P2-201 | ENST00000428512 | 440 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | ZFY-AS1-202 | ENST00000431145 | 419 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL606489.2-201 | ENST00000433886 | 234 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | RPL21P133-201 | ENST00000443666 | 476 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| MTERF3 | Q96E29 | AL118520.1-201 | ENST00000450770 | 291 nt | BASIC | 2.89 | □□□□□ -1.95 | | |