Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RTF1Q92541 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.33□□□□□ -1.72
RTF1Q92541 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.33□□□□□ -1.72
RTF1Q92541 AC008521.1-201ENST00000587471 187 ntBASIC4.33□□□□□ -1.72
RTF1Q92541 AC103710.3-201ENST00000608157 948 ntBASIC4.33□□□□□ -1.72
RTF1Q92541 SDR42E1P2-201ENST00000614861 481 ntBASIC4.33□□□□□ -1.72
RTF1Q92541 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.33□□□□□ -1.72
RTF1Q92541 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RTF1Q92541 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.33□□□□□ -1.72
RTF1Q92541 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC121333.1-201ENST00000567488 2709 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTF1Q92541 MTND4P23-201ENST00000447723 1363 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTF1Q92541 SNORD6-201ENST00000365444 73 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTF1Q92541 Y_RNA.460-201ENST00000384255 102 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 Y_RNA.530-201ENST00000384587 101 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 RNU6-550P-201ENST00000391057 101 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 UBE2V1P2-201ENST00000397758 440 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AL356968.1-201ENST00000416622 474 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 HSPE1P1-201ENST00000421494 318 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 MTATP6P4-201ENST00000427725 675 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 RPL7L1P10-201ENST00000427790 463 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.32□□□□□ -1.72
RTF1Q92541 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.32□□□□□ -1.72
RTF1Q92541 RNU6-1208P-201ENST00000459588 107 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 RN7SL504P-201ENST00000494496 287 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 Y_RNA.654-201ENST00000497848 106 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.32□□□□□ -1.72
RTF1Q92541 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC023141.12-201ENST00000512399 199 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 TTC39CP1-201ENST00000512513 755 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 PHBP14-201ENST00000512887 367 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 Y_RNA.691-201ENST00000516611 103 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC109635.4-202ENST00000531666 412 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC005498.1-201ENST00000592125 465 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AC012493.2-201ENST00000595083 291 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.32□□□□□ -1.72
RTF1Q92541 AC007687.1-201ENST00000602704 304 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AL365204.3-201ENST00000612448 685 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 AC012409.4-201ENST00000612923 249 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 MIR8057-201ENST00000620957 69 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 RMST_7.1-201ENST00000621935 268 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTF1Q92541 AC009812.4-201ENST00000569134 1805 ntBASIC4.32□□□□□ -1.72
RTF1Q92541 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RTF1Q92541 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTF1Q92541 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RTF1Q92541 RNU6-525P-201ENST00000363685 104 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 Y_RNA.373-201ENST00000365600 103 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 RNU6-831P-201ENST00000384548 107 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.31□□□□□ -1.72
RTF1Q92541 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.31□□□□□ -1.72
RTF1Q92541 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.31□□□□□ -1.72
RTF1Q92541 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.31□□□□□ -1.72
RTF1Q92541 CYCSP32-201ENST00000440548 321 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.31□□□□□ -1.72
RTF1Q92541 AC020550.1-201ENST00000447385 163 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 HMGN2P7-201ENST00000456186 273 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 RNU6-277P-201ENST00000516272 106 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 RN7SKP258-201ENST00000517151 304 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.31□□□□□ -1.72
RTF1Q92541 ERHP1-201ENST00000523006 310 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AP004371.1-201ENST00000525240 214 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.31□□□□□ -1.72
RTF1Q92541 SCOCP1-201ENST00000554676 349 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AL118558.2-201ENST00000556294 238 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.31□□□□□ -1.72
RTF1Q92541 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.31□□□□□ -1.72
RTF1Q92541 AC104763.2-201ENST00000604179 382 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTF1Q92541 AC092807.2-201ENST00000609367 243 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AC012531.5-201ENST00000611375 151 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AL157817.1-201ENST00000614264 790 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 AC007742.2-201ENST00000618226 398 ntBASIC4.31□□□□□ -1.72
RTF1Q92541 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
RTF1Q92541 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.3□□□□□ -1.72
RTF1Q92541 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTF1Q92541 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTF1Q92541 RNU6-335P-201ENST00000364563 113 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RNA5SP167-201ENST00000365461 116 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTF1Q92541 RNU6-116P-201ENST00000384042 109 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RNU4-47P-201ENST00000410876 114 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 NDUFB4P5-201ENST00000415445 361 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.3□□□□□ -1.72
RTF1Q92541 USP9YP20-201ENST00000419224 558 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AL451054.2-201ENST00000420896 202 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AL159169.1-201ENST00000421119 127 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 MTCO1P39-201ENST00000426148 480 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 RPL23AP82-202ENST00000427528 469 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.3□□□□□ -1.72
RTF1Q92541 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.3□□□□□ -1.72
RTF1Q92541 HMGB1P18-201ENST00000438801 619 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 NEFMP1-201ENST00000443423 1006 ntBASIC4.3□□□□□ -1.72
RTF1Q92541 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms