Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 AC092807.2-201ENST00000609367 243 ntBASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.31□□□□□ -1.72
SMC1BQ8NDV3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 MIR422A-201ENST00000362286 90 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 RNA5SP322-201ENST00000363617 119 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 Y_RNA.530-201ENST00000384587 101 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 RNU1-89P-201ENST00000384592 164 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 MTND3P8-201ENST00000412909 339 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 PDCL2P1-201ENST00000419302 352 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 NCOR1P3-201ENST00000420479 303 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AL645937.1-202ENST00000421799 937 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 SCARNA18-201ENST00000459004 134 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 RNU7-30P-201ENST00000516835 62 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 MIR4719-201ENST00000585233 84 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC243960.4-201ENST00000600532 288 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC022893.3-201ENST00000607665 437 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC009570.1-201ENST00000609599 745 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AC034102.8-201ENST00000615146 484 ntBASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMC1BQ8NDV3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RNU6-694P-201ENST00000364071 147 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RNU6-522P-201ENST00000364497 107 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RNA5SP424-201ENST00000390988 115 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AL356432.1-201ENST00000405809 419 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RPS12P24-201ENST00000412619 387 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC092809.3-201ENST00000415453 231 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 TXNP1-201ENST00000441872 371 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC006517.1-201ENST00000480485 328 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RPL31P13-201ENST00000484151 370 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RAC1P2-201ENST00000511164 579 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RNU4-49P-201ENST00000516080 140 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 SCARNA15.2-201ENST00000516409 127 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 MIR5583-1-201ENST00000580941 59 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC005498.1-201ENST00000592125 465 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC087045.1-201ENST00000605856 382 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC093732.2-201ENST00000607950 274 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC009233.1-201ENST00000616477 371 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AL591424.2-201ENST00000617023 128 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 AC022140.2-201ENST00000623500 188 ntBASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMC1BQ8NDV3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 RNU6-600P-201ENST00000362524 99 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 TAAR7P-201ENST00000436141 242 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 SNORA71B-202ENST00000439232 272 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AC087588.1-201ENST00000462203 316 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 CCDC34P1-201ENST00000507441 517 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 FAM206BP-201ENST00000510179 541 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AC022080.3-201ENST00000544433 482 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 AL118558.2-201ENST00000556294 238 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 RPS3AP23-202ENST00000574601 686 ntBASIC4.28□□□□□ -1.72
SMC1BQ8NDV3 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms