Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU2-8P-201ENST00000410727 190 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RAC1P6-201ENST00000423911 575 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC137499.1-201ENST00000427602 88 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC006946.1-201ENST00000429106 328 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 GPM6BP2-201ENST00000432046 144 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RPL36AP53-201ENST00000432891 316 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 NEFMP1-201ENST00000443423 1006 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MTCO1P19-201ENST00000443487 500 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC244505.5-201ENST00000443639 207 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 GPM6BP1-201ENST00000446387 144 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RPS15AP27-201ENST00000449183 343 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 SNORD97-201ENST00000459187 142 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RPL37P6-201ENST00000460682 294 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC087588.1-201ENST00000462203 316 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RAP1BP2-201ENST00000478270 544 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC006445.1-201ENST00000491925 405 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNU2-10P-201ENST00000516375 211 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC011979.2-201ENST00000527568 352 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MIR3682-201ENST00000581338 84 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MIR5092-201ENST00000583139 88 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC007363.1-201ENST00000604736 620 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC087752.4-201ENST00000605911 462 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC098614.4-201ENST00000607601 462 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 MIR7112-201ENST00000616126 65 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 FRG1KP-201ENST00000623592 341 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AP003399.1-201ENST00000637534 361 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CCDC71LQ8N9Z2 AC131280.1-202ENST00000624067 4211 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 CR848007.1-201ENST00000442354 1699 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-511P-201ENST00000363496 107 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RNY1P12-201ENST00000364251 105 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RNA5SP72-201ENST00000364442 117 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RNU6-14P-201ENST00000384630 106 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 Y_RNA.553-201ENST00000384670 102 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 BX295541.1-201ENST00000417774 250 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 MTCO2P34-201ENST00000421994 607 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 SKA2P1-201ENST00000425592 390 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL358075.3-201ENST00000426289 226 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 HMGB1P27-201ENST00000431429 603 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RPS15AP5-201ENST00000436276 388 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RPS12P2-201ENST00000439728 269 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 KATNBL1P3-201ENST00000443475 909 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC013267.1-201ENST00000458227 267 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 RN7SL432P-201ENST00000484057 298 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 MRPL42P6-201ENST00000486397 371 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC090136.1-201ENST00000520009 240 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 HMGB1P41-201ENST00000520234 440 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 MIR3913-1-201ENST00000577744 102 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 MIR4635-201ENST00000583759 79 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 NBR2-204ENST00000587322 63 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC012493.2-201ENST00000595083 291 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AC090578.1-201ENST00000604955 591 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 PISRT1-201ENST00000626175 531 ntBASIC2.23□□□□□ -2.05
CCDC71LQ8N9Z2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms