Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RAB9AP1-201ENST00000449393 573 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 PPP1R2P5-201ENST00000457256 603 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 RPL21P8-201ENST00000465083 535 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC092451.1-201ENST00000480211 153 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC098591.2-201ENST00000510152 315 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 GMPSP1-201ENST00000514075 579 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 RNU6-123P-201ENST00000516163 102 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 RANP3-201ENST00000530970 276 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC093027.1-201ENST00000546698 429 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 SCOCP1-201ENST00000554676 349 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AL118558.2-201ENST00000556294 238 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC026464.5-201ENST00000562497 722 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC106785.1-201ENST00000565935 262 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AP001330.4-201ENST00000604350 154 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC021646.1-201ENST00000605469 484 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AC135507.2-201ENST00000612443 309 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AL355810.1-201ENST00000614629 552 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP4Q8N3C7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CLIP4Q8N3C7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RNU4-79P-201ENST00000362764 141 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AL359837.1-201ENST00000381357 287 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 SNORA5A-201ENST00000384111 134 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RPS20P15-201ENST00000412792 311 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 Z99755.1-201ENST00000414048 380 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC016831.2-201ENST00000417179 352 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AL451054.2-201ENST00000420896 202 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RPL26P6-201ENST00000440913 438 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RPL23AP31-201ENST00000456160 467 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 VN1R17P-201ENST00000472048 1090 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC021205.2-201ENST00000480069 347 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC083904.1-201ENST00000487828 231 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 CCDC34P1-201ENST00000507441 517 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 FAM206BP-201ENST00000510179 541 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RNU6-685P-201ENST00000517088 95 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 RPL23AP84-201ENST00000571193 464 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC005498.1-201ENST00000592125 465 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC044792.1-201ENST00000593294 196 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC104763.2-201ENST00000604179 382 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC007619.2-201ENST00000605743 379 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC092807.2-201ENST00000609367 243 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AL365204.3-201ENST00000612448 685 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC012409.4-201ENST00000612923 249 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 AC118273.1-201ENST00000525324 3006 ntBASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP4Q8N3C7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 Y_RNA.58-201ENST00000362807 102 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 Y_RNA.154-201ENST00000363624 102 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RNY3P1-201ENST00000365085 102 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RNY3-201ENST00000365484 102 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 Y_RNA.490-201ENST00000384413 102 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RNU6-14P-201ENST00000384630 106 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RNA5SP111-201ENST00000411386 101 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RPL23AP82-202ENST00000427528 469 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 HMGB1P18-201ENST00000438801 619 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 PRPS1P1-201ENST00000445305 876 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 SCARNA18-201ENST00000459004 134 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 MTCO3P9-201ENST00000506989 781 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AC107934.2-201ENST00000518653 310 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AC245166.1-201ENST00000521012 253 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 ERHP1-201ENST00000523006 310 ntBASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.14□□□□□ -1.91
CLIP4Q8N3C7 MED28P6-201ENST00000558776 231 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms