Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL133396.1-201ENST00000432048 687 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AL353997.1-201ENST00000432936 108 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 HMGB1P12-201ENST00000438594 598 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 SNORD108-201ENST00000459332 71 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RPL9P32-201ENST00000464118 620 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RPS23P3-201ENST00000470993 430 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 HMGB1P22-201ENST00000505315 124 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC105758.1-201ENST00000506038 399 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC113155.1-201ENST00000511141 769 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-635P-201ENST00000516651 102 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-307P-201ENST00000516743 106 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AL157871.3-201ENST00000557231 293 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 MED28P6-201ENST00000558776 231 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC004817.2-201ENST00000561794 651 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 MIR3160-1-201ENST00000577972 85 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC113195.1-201ENST00000579952 141 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC005899.2-201ENST00000584353 90 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 VN1R85P-201ENST00000601587 426 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AL355598.1-201ENST00000604169 202 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC107294.1-201ENST00000609524 467 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 U4.1-201ENST00000620349 87 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 AC005183.1-201ENST00000603687 1979 ntBASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM48Q8IWZ4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 DEFB108F-201ENST00000344638 222 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.33-201ENST00000362591 102 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 U3.15-201ENST00000365398 212 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 SNORA41-201ENST00000384675 132 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 MIR301A-201ENST00000385261 86 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 RNU2-23P-201ENST00000410545 195 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AL158156.1-201ENST00000422509 473 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 HLA-N-201ENST00000437516 135 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 RPL23AP31-201ENST00000456160 467 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 U8.20-201ENST00000459445 131 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 RNU4-77P-201ENST00000516692 156 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 HMGB1P14-201ENST00000557424 591 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AC093227.2-201ENST00000589357 285 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 AL121917.1-203ENST00000605534 577 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 SNORD58B-201ENST00000607313 66 ntBASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM48Q8IWZ4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 Y_RNA.314-201ENST00000365114 102 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RNU1-115P-201ENST00000365329 160 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 SET-203ENST00000372688 801 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 SNORA57.1-201ENST00000391227 145 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RPL21P65-201ENST00000406094 466 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RNU6-325P-201ENST00000411132 105 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC114482.1-201ENST00000418010 247 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC007919.1-201ENST00000429380 217 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 OR4C10P-201ENST00000434991 931 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AL031274.1-201ENST00000450334 232 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AL353752.1-201ENST00000454946 260 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RNA5SP246-201ENST00000458909 119 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 snoU13.24-201ENST00000458998 104 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 FO393415.2-201ENST00000480085 343 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AL132838.2-201ENST00000492041 314 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RPL29P14-201ENST00000495837 428 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 MIR892C-201ENST00000516410 77 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AP002404.1-201ENST00000532005 451 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 RN7SL600P-201ENST00000581811 299 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 MIR3976-201ENST00000606807 139 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 AL360181.4-201ENST00000621752 134 ntBASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TRIM48Q8IWZ4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms